Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121106g00005 ATGGATCTTGAATGTCTTGAATGGAAACTTCCCAAGGATTTCCAACTTCCTAATAAGCTAAGGTATATTGAATGGAACAAATGCCCACTTAAGTTTGTGCCGTCCATTTGTTGGCCTCAAACAGTTGTTGAGCTTTCCATGCAAAATAGTAATGTTCACAAACTTTGGGATACAATACAGAATCTACCAAGTTTGGAGAAAATTGACCTCCATGGCTGCAAACGCTTGAAAGAGTGCCCAAATTTGGCAGGTGCCCGGAACCTCAAATTTATAAAACTGAGTGAGTGTGAAAGCTTACATGATGTTCATCCATCTATTTTCTCTCTCCCCAAGATTGAGGAACTAGATGTGGAAAATTGCATGGCCCTGAAGAGGCTTTGCAGTGACCATTGCTCACCCTCTCTCCATCGCTTGTGGGCCACTGGTTGCTCCAATTTGAAGGAGTTCTCAATCCCAATGAAGGGGGGCGGCCATGGTGTTCATTCCAAACTTGAGTTATATTTACTATCAACAGCTTTGAGTGAAGTCCCATCCACTGTTGTGCATCTCAATAATCTTAACTTGTTCGGTTTCAACATCAGTTACTCTCTCTCAAAACTTCCTCAAAACTTTGCCCACACAATTGCCCTCATGGATCCAATAAAACATGAAGATGAGCATGACACATGCATCATCTTAAGTAGAATATTTCCTACCCCTGCTTTCTTGTGTGTCAAGGAACTATATTTCTTCAGATGTAAGACATTGTCTAAGCTACCAGACAACATTCATGTCTTACAGTCATTACAATTATTAGTAATTCAGAGTTGTGGTGTCATTTTAAGTTTGCCAGAGAGCATCAAGAATCTTCAACAGCTCATGCAACTTTTCATCACTGACTGTGAAATGCTTCAATATGTGCCTCCATTTCCCCCTTCTATTGTATACTATTGTGTAGTGAACTGTAAATCTCTGGAGACAATCTCGAGTTTAACCAGTGAATTGCCACCAAGAAGAAAACAGAATGCATTATCGCGTTATCGCGGCTTGTATTTTCAGTTTGGATTCCATAACTGCACAAAGTTGGATGATCATGCATATGAAGCCGTTCTGAAAGACTTAAAATCCAGGATAGAACTCGTGGCGAGCGATGAACATCCGAATAATAATGGTAATATATTCTACTATTTACCAAGTAAGGAGAGAATACTTAATGAATGGTTCCCTCACTACTACTCTACAGAAGCTTCCATCATTGTTGAAGTTCCTCCAAATCACCACAAGATTTCTTCTTCTTGTCTTGTTGTCTGCATGTTGCTTTCTGAATACCGGACTAACTTCTTTTGCAAGAAAGACGAAGGGACATTTGTATTTGAATGCTACCTGGAAAAGGGTTGCAATGAATGGGAATGGTTAGCAAGTTCTTACAATAGAGCAAACTTATCTTTTTGTCTGGATCCTTTTACTAGATTGGAAATGGAGTCAGATCATGTGGCAGTATGGTATGATCCAGAGAATTCCAACAAGATAATGGAAGCAATAATCAAAGAGAGAAAGAGGGGCACCACTACTTGCAATCCTATCCTTAAATTTAAATTTAAGTTGTATGCTAATCATAAAGATGATGAGGAAGATGTGATAAAGGGATGTGGGATCCGTTGGATGCATGTAGATGTCAATGATGAAGGAGAGGGCTTTGAATATGATTCTGATGACTTGGAGTTAGAGAACCCAGAGGAGGGGGAAAAAAGAGCTTATGTGGGGAACATCTGA 1752 0.3973 MDLECLEWKLPKDFQLPNKLRYIEWNKCPLKFVPSICWPQTVVELSMQNSNVHKLWDTIQNLPSLEKIDLHGCKRLKECPNLAGARNLKFIKLSECESLHDVHPSIFSLPKIEELDVENCMALKRLCSDHCSPSLHRLWATGCSNLKEFSIPMKGGGHGVHSKLELYLLSTALSEVPSTVVHLNNLNLFGFNISYSLSKLPQNFAHTIALMDPIKHEDEHDTCIILSRIFPTPAFLCVKELYFFRCKTLSKLPDNIHVLQSLQLLVIQSCGVILSLPESIKNLQQLMQLFITDCEMLQYVPPFPPSIVYYCVVNCKSLETISSLTSELPPRRKQNALSRYRGLYFQFGFHNCTKLDDHAYEAVLKDLKSRIELVASDEHPNNNGNIFYYLPSKERILNEWFPHYYSTEASIIVEVPPNHHKISSSCLVVCMLLSEYRTNFFCKKDEGTFVFECYLEKGCNEWEWLASSYNRANLSFCLDPFTRLEMESDHVAVWYDPENSNKIMEAIIKERKRGTTTCNPILKFKFKLYANHKDDEEDVIKGCGIRWMHVDVNDEGEGFEYDSDDLELENPEEGEKRAYVGNI 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121106g00005 583 Gene3D Ribonuclease Inhibitor 2 154 IPR032675 -
Stsc121106g00005 583 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 174 361 - -
Stsc121106g00005 583 SUPERFAMILY L domain-like 4 329 - -
Stsc121106g00005 583 Gene3D Ribonuclease Inhibitor 218 357 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121106g00005 Stsc-Chr121106 18207 21020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121106g00005 16 293 WRKY Transcription Factor Family AT4G12020 28.374 1.74e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121106g00005 - - aip:107624696 706.442