Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121080g00005 ATGTATGCAGAAACCGGTCTTCTCTTCCCTCAGATGCAGAATTTCTCTCATCACGACCTTCATCAACTCGACGAGTATTGCAATAACTTCAAGTCTATTCCTTCATTGGGTGACCCTGTTCAATCTTCTGTCATGTTGGAGTATGATTTGGCAGCAGAGGGTGATCTGTTCAAAGCACCAGAACCTATTTTTGAGGAGTCATTCACGAACCTTGATCCTGTGACGGCAGCCATCTCAATGATATCTTGTGGGGAAGATGTCTGCTCGCAGGGACTAAAATCCACTGATATCGATGTTCTTCAAAAGGAACAACTTCTGAGTGATGTATTTTATGAGTGCGAAAAGGATCTCTTAGAAAAGGCAGCAATAGACTTGCCGTTCTCTGAGATTCTGGAAATCAAAGTTCCTGTTCTTAACACTGAGAACTCAATTGAAGAAAAGAAACAAGTTCTAGACTTGCCGCCGTTACCAAAGAGTGTCAGTTCAGGAAGTTTGAGCTCAATGGACTGGATGCATGGAGCTGCTATGAAGCCTGCTTTCCTTGATGTCCCGGGAATAGATTTTGATGAAGTTTATGGCATGCGGAGATCATTTAGTGAGGGAGATATAAAGACTTTAGGCAATGGCAATCTGAACATAGTCCAGTCTCCCCGTGAGAGGCATTTGCTTATCAGTAACTCCATCAAAGAGGAACGCCAAGAGAAGCTATCCAGATACAGGAATAAAAAGACCAAGAGGAATTTTGGAAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGCCAGCCAAGAATCCGCGGAAGATTTGCAAAAACCGAAGAATATGATACCAAGAGGCAATGA 849 0.4311 MYAETGLLFPQMQNFSHHDLHQLDEYCNNFKSIPSLGDPVQSSVMLEYDLAAEGDLFKAPEPIFEESFTNLDPVTAAISMISCGEDVCSQGLKSTDIDVLQKEQLLSDVFYECEKDLLEKAAIDLPFSEILEIKVPVLNTENSIEEKKQVLDLPPLPKSVSSGSLSSMDWMHGAAMKPAFLDVPGIDFDEVYGMRRSFSEGDIKTLGNGNLNIVQSPRERHLLISNSIKEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEEYDTKRQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121080g00005 282 Pfam CCT motif 232 274 IPR010402 GO:0005515
Stsc121080g00005 282 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
Stsc121080g00005 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 166 274 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121080g00005 Stsc-Chr121080 22515 27403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121080g00005 213 278 C2C2-CO-like Transcription Factor Family AT3G21880 41.791 1.17e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc121080g00005 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121080g00005 - - gmx:100814332 416.772