Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121078g00011 ATGTTTCTGATTGAGGATATCTGGCCAACGCTCCAGCAACTCCTTCCAAATACACCTCTTCCTTCAGCATCGGTTTTCCAGCACCTGCCGGAATTCATGACGGCCTCCTCATGCGCCGACCGGGGCTCCGACCTCTGCCGCGACGACTCGGCCGCCTTCGTTCTCAAGTTCGTCGCCATCGCCTCAATCCTCCTCTCTGGAATGGCCGGGATCGCTATTCCGCTCATCGGGAAACACCGCCGATTCCTCCGGACAGACGGAAACCTATTCGTCGCCGCGAAAGCCTTTGCGGCCGGTGTCATACTCGCCACCGGGTTCGTCCATATGCTATCAGACGCCACGGAGGCGCTGAACGACCCGTGCCTACCGAAGTACCCGTGGCACAAGTTTCCGTTCACGGGATTCTTCTCGATGTTGGCGGCTCTCTTCACCCTGCTGCTTGATTTCTTGGGGACTCAGTACTACGAGCGGAAGCAAGGGGTGAACCGTGCGGTGGAGGAGCAGGCGCGAGTGGGAACTTCGGAGTCCGGCGTAGAAGATGGGATCGTGGAGGTGAAGGATTATAGTGGGAAAGTTTTTGGAGAAGAAGAGAAGGGTGGAATGCACATAGTGGGGATGCATGCGCACGCCGCTCACCATAGACATAACCACCCCCATGGCCAGGACGCATGCCACGGCATTGGTGGCGGAGTCAGGCCCCACGACCACGGCCACAGCCATGTCCACGGCATGCTTGACGACGAAGATAGTGATGTTCGCCACGTGGTTGTTTCTCAGGTGCTTGAACTTGGGATAGTGTCACACTCAGTGATAATTGGGTTGTCTCTTGGGGTATCTCAGAGCCCATGCACCATAAGGCCCTTAATTGCAGCATTGTCCTTTCACCAGTTCTTTGAAGGGTTTGCACTTGGAGGATGCATCTCCCAAGCACAATTCAAGACCTCATCCGCAACAATAATGGCTTGTTTCTTTGCACTGACCACACCCACCGGTGTGGGGATCGGAACGGCGATAGCATCGGTGTATAATCCTTACAGTCCAGGTGCCCTCATCACGGAGGGCATACTGGACTCTTTGTCAGCAGGGATATTAGTGTACATGGCGTTAGTAGACTTGATAGCGGCAGATTTTCTTAGCAAAAGAATGAGTTGTAATTTTAGGCTGCAGATAGTGTCTTACTGTATGCTTTTTCTTGGGGCTGGATTGATGTCTTCGCTCGCAATCTGGGCTTGA 1233 0.541 MFLIEDIWPTLQQLLPNTPLPSASVFQHLPEFMTASSCADRGSDLCRDDSAAFVLKFVAIASILLSGMAGIAIPLIGKHRRFLRTDGNLFVAAKAFAAGVILATGFVHMLSDATEALNDPCLPKYPWHKFPFTGFFSMLAALFTLLLDFLGTQYYERKQGVNRAVEEQARVGTSESGVEDGIVEVKDYSGKVFGEEEKGGMHIVGMHAHAAHHRHNHPHGQDACHGIGGGVRPHDHGHSHVHGMLDDEDSDVRHVVVSQVLELGIVSHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFKTSSATIMACFFALTTPTGVGIGTAIASVYNPYSPGALITEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCMLFLGAGLMSSLAIWA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121078g00011 410 NCBIfam ZIP zinc/iron transport family 38 410 IPR004698 GO:0005385|GO:0016020|GO:0071577
Stsc121078g00011 410 PANTHER ZINC/IRON TRANSPORTER 53 403 - -
Stsc121078g00011 410 Pfam ZIP Zinc transporter 54 407 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121078g00011 Stsc-Chr121078 44815 47045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121078g00011 15 410 Inorganic Solute Cotransporters AT1G60960 67.554 3.00e-180 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121078g00011 K14709 - gmx:100812212 620.157