Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121078g00003 ATGGGTATCTGCATATCCACTGAATCTTCAGAGATTCATCATGAATCATCTAAATTAGCTACTGATGAGAATTTAACAGTGTTTGAGCCTAGCAAGAATAGTAAATTAAGTAAGATTCACAGACTTTCTTCTATTTACTCTAAAAAGGGTAGCAAAGGACTCAACCAAGATGCTGCCACTCTTTACCAGGGTTATGAAATGGAGGATGCAGCATTTTGTGGTGTTTTTGATGGACACGGAAGGAATGGTCGCATAGTGAGCCAAATAGTAAACAAGCGTTTGTCTTCACTCATTCTGAACCAAAAGAATATGATAGCTCATGCCAAGAGTGATGATAACAACATCATATTAGAAGATGATGACTCGTGTACAAACAAGAATTTTCAAGAATGGAAAGGAGCTATTCTTAGTGCTTTCAGGGTGATGGACAAGGAGGTGAATCAACTAGAGAATCTAGATTTCTCTTGCAGTGGAACTACAGCTATAGTTGCTATAAGACAGAATGAAGATCTTATCATGGCTAACCTTGGTGACTCAAGAGCTGTGTTGGGGACAATATGTGACGGTGAAATCATTCCCATTCAACTGTCCACAGATATGAAGCCTGGTTTACCTGATGAAGCAGATAGAATAAGAAGTTGTAATGGTCGTGTATTTGCTCTACATGAGGAACCACACATCCAAAGAGTGTGGTTACCCAATGAGAACGCCCCAGGCCTGGCTATGTCTCGTGCTTTTGGAGATTTCATCCTTAAGGACCATGGTATTATTGCTATTCCGGAGATTTCATATCGCCCTCTAACATCAAGTGACCAATTTCTTGTGCTTGCAAGTGATGGGGTGTGGGATGTACTAAGCAACAATGAGGTTTGCTCAATTGTGTGGACAACCGAGAATGAAGCAGCAGCAGCAAAGGCAGTGGTGGAAGCAGCTACGGCAGCATGGAAAAGCAAATATCCTTCCTCCAGGGTAGACGACTGCACTGTGGTTTGCCTCTTCCTGCAGAAGAAACAGAAGAGCCTAGTGCATGCAAAAACTGGAAATAACGTTAATCCTTGTGATAACTTGCATAAGAAGGCCTTGCTATAA 1089 0.416 MGICISTESSEIHHESSKLATDENLTVFEPSKNSKLSKIHRLSSIYSKKGSKGLNQDAATLYQGYEMEDAAFCGVFDGHGRNGRIVSQIVNKRLSSLILNQKNMIAHAKSDDNNIILEDDDSCTNKNFQEWKGAILSAFRVMDKEVNQLENLDFSCSGTTAIVAIRQNEDLIMANLGDSRAVLGTICDGEIIPIQLSTDMKPGLPDEADRIRSCNGRVFALHEEPHIQRVWLPNENAPGLAMSRAFGDFILKDHGIIAIPEISYRPLTSSDQFLVLASDGVWDVLSNNEVCSIVWTTENEAAAAKAVVEAATAAWKSKYPSSRVDDCTVVCLFLQKKQKSLVHAKTGNNVNPCDNLHKKALL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121078g00003 362 PANTHER PROTEIN PHOSPHATASE 40 332 IPR015655 GO:0004722|GO:0006470
Stsc121078g00003 362 SUPERFAMILY PP2C-like 38 335 IPR036457 -
Stsc121078g00003 362 Gene3D - 25 338 IPR036457 -
Stsc121078g00003 362 ProSiteProfiles PPM-type phosphatase domain profile. 42 334 IPR001932 -
Stsc121078g00003 362 SMART PP2C_4 30 332 IPR001932 -
Stsc121078g00003 362 Pfam Protein phosphatase 2C 68 312 IPR001932 -
Stsc121078g00003 362 CDD PP2Cc 41 334 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121078g00003 Stsc-Chr121078 10084 12360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121078g00003 1 339 PP2C-type Phosphatase Gene Family AT5G26010 51.744 2.54e-107 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121078g00003 - - gmx:100795893 452.21