Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121077g00011 ATGTTGGATGCAGGTAAGAGGTTTGTATATTGGAACGGAACAGAGCCAAGGTTGTGTCTAACGGAGACTGAATTGATCAAAGAGTTTCTGTCGAAATGCAGCACGGTTTCTGGGAGGTCATGGCAGCAAAGGCAGGGATCAAAGCATTTCATCGGAGGAGGATTGTTGATGGCCAATGCCCAAGATTGGTACCATCAACGACACATAGTTGCCCCTGCATTCGCCGGAGACAGACTCAAAGGATATGCAGGGCACATGGTTGAATGCACTAAAGAAATGCTTCAATCGCTACAAAATGCATTGGACAGTGGCCGGAATGAGGTTGAGATTGGCGAATACATGACCAAACTCACTGCTGATATTATCTCAAGAACGGAGTTCGGCACAAGCTACCACAAGGGCAAGAAAATATTCCATCTCCTCAAAGTGTTGCAGACTCGTTGCGCTCAAGCCAGTCGTCATCTTTGCTTTCCCGGAAGCAGGTATTTTCCGAGCAAGTATAACAGAGAGATAAAGTCGTTGAAGATGGAAGTGGAGAGACTATTGATGGAGATAATACAGAGCAGAAAAGACTGCGTTGAAATTGGAAGGAGTGAGTCGTATGGGAGTGACTTGTTAGGGATGCTGCTGAATGAGATGGAGAAGAAGAATAGCTTGGATCTTCAGTTGGTGATGGATGAATGTAAGACATTCTTCTTTGCTGGACATGAAACCACTGCACTCTTGCTTACATGGACAGTTATGTTGTTAGCATCAAATCCCTCTTGGCAACAAAAAGTTAGAGATGAGATCAAAACCATATGCAATGATTCTGGAATCCCCTCTCTCGATCAACTCTCCAAGCTCACTCTTGTAAGTCCCAATATTCCTCTTCTAAGCCTGTTTTTTTCATACAAATATTTGAGATTTATTATTTGTGGACACTAA 927 0.4347 MLDAGKRFVYWNGTEPRLCLTETELIKEFLSKCSTVSGRSWQQRQGSKHFIGGGLLMANAQDWYHQRHIVAPAFAGDRLKGYAGHMVECTKEMLQSLQNALDSGRNEVEIGEYMTKLTADIISRTEFGTSYHKGKKIFHLLKVLQTRCAQASRHLCFPGSRYFPSKYNREIKSLKMEVERLLMEIIQSRKDCVEIGRSESYGSDLLGMLLNEMEKKNSLDLQLVMDECKTFFFAGHETTALLLTWTVMLLASNPSWQQKVRDEIKTICNDSGIPSLDQLSKLTLVSPNIPLLSLFFSYKYLRFIICGH 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121077g00011 308 Coils Coil 87 107 - -
Stsc121077g00011 308 Gene3D Cytochrome P450 3 289 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00011 308 PRINTS E-class P450 group I signature 223 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00011 308 PRINTS E-class P450 group I signature 117 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00011 308 PRINTS E-class P450 group I signature 243 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00011 308 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 286 - -
Stsc121077g00011 308 SUPERFAMILY Cytochrome P450 5 284 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00011 308 Pfam Cytochrome P450 5 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00011 308 Coils Coil 171 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121077g00011 Stsc-Chr121077 59493 61316 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121077g00011 5 303 Cytochrome P450 AT5G38450 66.447 5.68e-132 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121077g00011 K10717 - gmx:100808392 487.263