Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121077g00010 ATGGCCATGGTGATGGTGGTTACGATCCTTGTGATTGTGAGCCTGCTACTGAAAGTGGCCTATGAAACCATATCATGCTACTGGCTAACCCCGCTGAGAATCAAGAAGATCATGGAGATGCAAGGCGTTGGTGGCCCAAAGCCCCGATTCTTCAGCGGCAACATCTTGGACATGGCTTCCCTTGTCTCAAAAACAACCTCTCATGACATGAAAACCATTAGCCACGACATCGTCGGCCGCCTCCTCCCGCATTTTCTCCTCTGGTCCTCCCAATATGGTAAGAGGTTTGTATATTGGAACGGAACAGAGCCAAGGTTGTGTCTAACGGAGACTGAATTGATCAAAGAGTTTCTGTCGAAATGCAGCACGGTTTCTGGGAGGTCATGGCAGCAAAGGCAGGGATCAAAGCATTTCATCGGAGGAGGATTGTTGATGGCCAATGCCCAAGATTGGTACCATCAACGACACATAGTTGCCCCTGCATTCGCCGGAGACAGACTCAAAGGATATGCAGGGCACATGGTTGAATGCACTAAAGAAATGCTTCAATCGCTACAAAATGCATTGGACAGTGGCCGGAATGAGGTTGAGATTGGCGAATACATGACCAAACTCACTGCTGATATTATCTCAAGAACGGAGTTCGGCACAAGCTACCACAAGGGCAAGAAAATATTCCATCTCCTCAAAGTGTTGCAGACTCGTTGCGCTCAAGCCAGTCGTCATCTTTGCTTTCCCGGAAGCAGGTATTTTCCGAGCAAGTATAACAGAGAGATAAAGTCGTTGAAGATGGAAGTGGAGAGACTATTGATGGAGATAATACAGAGCAGAAAAGACTGCGTTGAAATTGGAAGGAGTGAGTCGTATGGGAGTGACTTGTTAGGGATGCTGCTGAATGAGATGGAGAAGAAGAATAGCTTGGATCTTCAGTTGGTGATGGATGAATGTAAGACATTCTTCTTTGCTGGACATGAAACCACTGCACTCTTGCTTACATGGACAGTTATGTTGTTAGCATCAAATCCCTCTTGGCAACAAAAAGTTAGAGATGAGATCAAAACCATATGCAATGATTCTGGAATCCCCTCTCTCGATCAACTCTCCAAGCTCACTCTTTTGCATATGGTAATAAATGAGTCAATGAGGCTTTATCCGCCAGCATTAGTGCTACCAAGAATGGCGTTTGAAGATATATTATTGGGTGACCTTTATATCCCTAAAGGCTTATCAATTTGGATCCCTGTGTTGGCCATTCACCACAGTGAAAAGTTATGGGGCAAAGATGCAAATGAGTTTAATCCAGACAGGTTTACTTCAAAGTCATACACACCTGGTCGTTTTTTACCATTTGCTTCTGGCCCTAGAAATTGTGTTGGTCAAGCATTTGCATTAATGGAAGCCAAGATCATATTAGCTATGTTAATCTCTCGCTATAGCTTCACTATTTCTGATAATTACCATCATGCCCCTGTCGTTGTCCTCACTATCAAGCCCAAGTATGGAGTTCAAGTTTGTTTGAAGCCCTTGGAGACATGA 1536 0.4453 MAMVMVVTILVIVSLLLKVAYETISCYWLTPLRIKKIMEMQGVGGPKPRFFSGNILDMASLVSKTTSHDMKTISHDIVGRLLPHFLLWSSQYGKRFVYWNGTEPRLCLTETELIKEFLSKCSTVSGRSWQQRQGSKHFIGGGLLMANAQDWYHQRHIVAPAFAGDRLKGYAGHMVECTKEMLQSLQNALDSGRNEVEIGEYMTKLTADIISRTEFGTSYHKGKKIFHLLKVLQTRCAQASRHLCFPGSRYFPSKYNREIKSLKMEVERLLMEIIQSRKDCVEIGRSESYGSDLLGMLLNEMEKKNSLDLQLVMDECKTFFFAGHETTALLLTWTVMLLASNPSWQQKVRDEIKTICNDSGIPSLDQLSKLTLLHMVINESMRLYPPALVLPRMAFEDILLGDLYIPKGLSIWIPVLAIHHSEKLWGKDANEFNPDRFTSKSYTPGRFLPFASGPRNCVGQAFALMEAKIILAMLISRYSFTISDNYHHAPVVVLTIKPKYGVQVCLKPLET 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121077g00010 511 Gene3D Cytochrome P450 28 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00010 511 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00010 511 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00010 511 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00010 511 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00010 511 Coils Coil 259 279 - -
Stsc121077g00010 511 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00010 511 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00010 511 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00010 511 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00010 511 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00010 511 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00010 511 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00010 511 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 501 - -
Stsc121077g00010 511 Coils Coil 175 195 - -
Stsc121077g00010 511 SUPERFAMILY Cytochrome P450 76 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00010 511 Pfam Cytochrome P450 90 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121077g00010 Stsc-Chr121077 59493 63769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121077g00010 1 371 Cytochrome P450 AT5G38450 67.374 2.24e-175 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121077g00010 K10717 - gmx:100808392 889.026