Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121077g00009 ATGGCCATGGTGATGGTGGTTACGATCCTTGTGATTGTGAGCCTGCTACTGAAAGTGGCCTATGAAACCATATCATGCTACTGGCTAACCCCGCTGAGAATCAAGAAGATCATGGAGATGCAAGGCGTTGGTGGCCCAAAGCCCCGATTCTTCAGCGGCAACATCTTGGACATGGCTTCCCTTGTCTCAAAAACAACCTCTCATGACATGAAAACCATTAGCCACGACATCGTCGGCCGCCTCCTCCCGCATTTTCTCCTCTGGTCCTCCCAATATGGTAAGAGGTTTGTATATTGGAACGGAACAGAGCCAAGGTTGTGTCTAACGGAGACTGAATTGATCAAAGAGTTTCTGTCGAAATGCAGCACGGTTTCTGGGAGGTCATGGCAGCAAAGGCAGGGATCAAAGCATTTCATCGGAGGAGGATTGTTGATGGCCAATGCCCAAGATTGGTACCATCAACGACACATAGTTGCCCCTGCATTCGCCGGAGACAGACTCAAAGGATATGCAGGGCACATGGTTGAATGCACTAAAGAAATGCTTCAATCGCTACAAAATGCATTGGACAGTGGCCGGAATGAGGTTGAGATTGGCGAATACATGACCAAACTCACTGCTGATATTATCTCAAGAACGGAGTTCGGCACAAGCTACCACAAGGGCAAGAAAATATTCCATCTCCTCAAAGTGTTGCAGACTCGTTGCGCTCAAGCCAGTCGTCATCTTTGCTTTCCCGGAAGCAGGTATTTTCCGAGCAAGTATAACAGAGAGATAAAGTCGTTGAAGATGGAAGTGGAGAGACTATTGATGGAGATAATACAGAGCAGAAAAGACTGCGTTGAAATTGGAAGGAGTGAGTCGTATGGGAGTGACTTGTTAGGGATGCTGCTGAATGAGATGGAGAAGAAGAATAGCTTGGATCTTCAGTTGGTGATGGATGAATGTAAGACATTCTTCTTTGCTGGACATGAAACCACTGCACTCTTGCTTACATGGACAGTTATGTTGTTAGCATCAAATCCCTCTTGGCAACAAAAAGTTAGAGATGAGATCAAAACCATATGCAATGATTCTGGAATCCCCTCTCTCGATCAACTCTCCAAGCTCACTCTTGTAAGTCCCAATATTCCTCTTCTAAGCCTGTTTTTTTCATACAAATATTTGAGATTTATTATTTGTGGACACTAA 1191 0.4517 MAMVMVVTILVIVSLLLKVAYETISCYWLTPLRIKKIMEMQGVGGPKPRFFSGNILDMASLVSKTTSHDMKTISHDIVGRLLPHFLLWSSQYGKRFVYWNGTEPRLCLTETELIKEFLSKCSTVSGRSWQQRQGSKHFIGGGLLMANAQDWYHQRHIVAPAFAGDRLKGYAGHMVECTKEMLQSLQNALDSGRNEVEIGEYMTKLTADIISRTEFGTSYHKGKKIFHLLKVLQTRCAQASRHLCFPGSRYFPSKYNREIKSLKMEVERLLMEIIQSRKDCVEIGRSESYGSDLLGMLLNEMEKKNSLDLQLVMDECKTFFFAGHETTALLLTWTVMLLASNPSWQQKVRDEIKTICNDSGIPSLDQLSKLTLVSPNIPLLSLFFSYKYLRFIICGH 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121077g00009 396 Pfam Cytochrome P450 90 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00009 396 Coils Coil 259 279 - -
Stsc121077g00009 396 SUPERFAMILY Cytochrome P450 75 372 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00009 396 Gene3D Cytochrome P450 28 377 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00009 396 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 374 - -
Stsc121077g00009 396 Coils Coil 175 195 - -
Stsc121077g00009 396 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00009 396 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00009 396 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00009 396 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121077g00009 Stsc-Chr121077 59492 61459 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121077g00009 1 391 Cytochrome P450 AT5G38450 64.736 1.17e-177 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121077g00009 K10717 - gmx:100808392 625.165