Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121077g00008 ATGTTGGATGCAGGTAAGAGGTTTGTATATTGGAACGGAACAGAGCCAAGGTTGTGTCTAACGGAGACTGAATTGATCAAAGAGTTTCTGTCGAAATGCAGCACGGTTTCTGGGAGGTCATGGCAGCAAAGGCAGGGATCAAAGCATTTCATCGGAGGAGGATTGTTGATGGCCAATGCCCAAGATTGGTACCATCAACGACACATAGTTGCCCCTGCATTCGCCGGAGACAGACTCAAAGGATATGCAGGGCACATGGTTGAATGCACTAAAGAAATGCTTCAATCGCTACAAAATGCATTGGACAGTGGCCGGAATGAGGTTGAGATTGGCGAATACATGACCAAACTCACTGCTGATATTATCTCAAGAACGGAGTTCGGCACAAGCTACCACAAGGGCAAGAAAATATTCCATCTCCTCAAAGTGTTGCAGACTCGTTGCGCTCAAGCCAGTCGTCATCTTTGCTTTCCCGGAAGCAGGTATTTTCCGAGCAAGTATAACAGAGAGATAAAGTCGTTGAAGATGGAAGTGGAGAGACTATTGATGGAGATAATACAGAGCAGAAAAGACTGCGTTGAAATTGGAAGGAGTGAGTCGTATGGGAGTGACTTGTTAGGGATGCTGCTGAATGAGATGGAGAAGAAGAATAGCTTGGATCTTCAGTTGGTGATGGATGAATGTAAGACATTCTTCTTTGCTGGACATGAAACCACTGCACTCTTGCTTACATGGACAGTTATGTTGTTAGCATCAAATCCCTCTTGGCAACAAAAAGTTAGAGATGAGATCAAAACCATATGCAATGATTCTGGAATCCCCTCTCTCGATCAACTCTCCAAGCTCACTCTTTTGCATATGGTAATAAATGAGTCAATGAGGCTTTATCCGCCAGCATTAGTGCTACCAAGAATGGCGTTTGAAGATATATTATTGGGTGACCTTTATATCCCTAAAGGCTTATCAATTTGGATCCCTGTGTTGGCCATTCACCACAGTGAAAAGTTATGGGGCAAAGATGCAAATGAGTTTAATCCAGACAGGTTTACTTCAAAGTCATACACACCTGGTCGTTTTTTACCATTTGCTTCTGGCCCTAGAAATTGTGTTGGTCAAGCATTTGCATTAATGGAAGCCAAGATCATATTAGCTATGTTAATCTCTCGCTATAGCTTCACTATTTCTGATAATTACCATCATGCCCCTGTCGTTGTCCTCACTATCAAGCCCAAGTATGGAGTTCAAGTTTGTTTGAAGCCCTTGGAGACATGA 1272 0.4316 MLDAGKRFVYWNGTEPRLCLTETELIKEFLSKCSTVSGRSWQQRQGSKHFIGGGLLMANAQDWYHQRHIVAPAFAGDRLKGYAGHMVECTKEMLQSLQNALDSGRNEVEIGEYMTKLTADIISRTEFGTSYHKGKKIFHLLKVLQTRCAQASRHLCFPGSRYFPSKYNREIKSLKMEVERLLMEIIQSRKDCVEIGRSESYGSDLLGMLLNEMEKKNSLDLQLVMDECKTFFFAGHETTALLLTWTVMLLASNPSWQQKVRDEIKTICNDSGIPSLDQLSKLTLLHMVINESMRLYPPALVLPRMAFEDILLGDLYIPKGLSIWIPVLAIHHSEKLWGKDANEFNPDRFTSKSYTPGRFLPFASGPRNCVGQAFALMEAKIILAMLISRYSFTISDNYHHAPVVVLTIKPKYGVQVCLKPLET 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121077g00008 423 Coils Coil 87 107 - -
Stsc121077g00008 423 PRINTS P450 superfamily signature 360 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00008 423 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00008 423 PRINTS P450 superfamily signature 234 251 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00008 423 PRINTS P450 superfamily signature 287 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00008 423 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 413 - -
Stsc121077g00008 423 Pfam Cytochrome P450 5 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00008 423 SUPERFAMILY Cytochrome P450 5 420 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00008 423 Gene3D Cytochrome P450 3 422 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00008 423 Coils Coil 171 191 - -
Stsc121077g00008 423 PRINTS E-class P450 group I signature 117 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00008 423 PRINTS E-class P450 group I signature 223 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00008 423 PRINTS E-class P450 group I signature 243 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00008 423 PRINTS E-class P450 group I signature 369 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00008 423 PRINTS E-class P450 group I signature 359 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121077g00008 423 PRINTS E-class P450 group I signature 327 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121077g00008 Stsc-Chr121077 59492 63935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121077g00008 5 283 Cytochrome P450 AT5G38450 70.070 5.35e-130 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121077g00008 K10717 - gmx:100808392 751.125