Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121077g00007 ATGGCTCCAGCTTGGATGAATTCAAACTTTGATGGTGACAATAACAAGAAGAAGAAAGTGTTGTTCATAATGGGAGCAACAGGAACTGGAAAATCGAAACTTTCCATCAACTTGGGGACCCAATTCCCCTGTGAGATAATCAATTCAGACAAAATCCAAGTGTACAAAGGGCTTGACATTGTGACAAACAAGATCCCACAATCCCAACAATGTGACATTCCTCATCACTTGCTGAGCATAATTGATGACCCTGATTATGATTTCACGGCAAATGATTTCTGCAAGCATGTTCATGATGCCCTTGATATCATAATCGAAAATAATGGGCACATACCCATCATTGTTGGAGGCTCAAATTCATACCTTGAGGCATTAGTTGATGATGAATTTCGGTCCAACTATGAATGTTGCTTCATTTGTCTTGATGTGTCTTTGCCTGTTCTGTTTGAATACTTAGACAGAAGGTTGGATGAGATGGTTGATGCTGGTGCTGTTGATGAAATTCGGCGTGAGGCTTTTCTTCCCAACAATAATGGTGATTACTCTCGTGGGATTAGAAGAGCCATTGGAGTTGCTGAGTTTCATAGCTATTTGCACATTGAGAATGATCCAAGTGTTGATGAGGCTTATAAGAAACAGGTGTTTGATCATGCAATTAATAGCACCAAGATCAATACTCATAAGCTGGCTGAGAATCAAGTCATGAAGATCAATCGGATGATCAATCAGCTTGGTTGGAAAATGACCAGAATTGATTCTACACCTGTGTTTGAGGCTATGCTAGGTGGACAAGAAGATTACATGCATATTTATCATCAGCTTGTCTTCAAACCAGCTTTGGAGATGGCAAGGATGTTTCTGGACACTCACCAAGAATGA 879 0.4016 MAPAWMNSNFDGDNNKKKKVLFIMGATGTGKSKLSINLGTQFPCEIINSDKIQVYKGLDIVTNKIPQSQQCDIPHHLLSIIDDPDYDFTANDFCKHVHDALDIIIENNGHIPIIVGGSNSYLEALVDDEFRSNYECCFICLDVSLPVLFEYLDRRLDEMVDAGAVDEIRREAFLPNNNGDYSRGIRRAIGVAEFHSYLHIENDPSVDEAYKKQVFDHAINSTKINTHKLAENQVMKINRMINQLGWKMTRIDSTPVFEAMLGGQEDYMHIYHQLVFKPALEMARMFLDTHQE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121077g00007 292 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 145 248 - -
Stsc121077g00007 292 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 17 286 IPR039657 -
Stsc121077g00007 292 Gene3D - 17 287 IPR027417 -
Stsc121077g00007 292 Pfam IPP transferase 131 234 - -
Stsc121077g00007 292 Pfam IPP transferase 53 128 - -
Stsc121077g00007 292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 211 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121077g00007 Stsc-Chr121077 45123 46001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121077g00007 132 292 C2H2 Transcription Factor Family AT2G27760 31.720 1.15e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121077g00007 K10760 - gmx:121173984 350.903