Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121070g00004 ATGGGTGTCTCTGGGAAATGGATTAGATCATTAATTGGTCTAAAGAAGTCGGTAAAGGCAGAGTCTTCAGAGAAGGACCAAAATAAGGTTGGCAAGTCTCGGCATCAAAGAAAGCATTCGGTTCAATTTGATAATGGTAAACTTCAAAATGACCTTGATGATGATGTGACTCTGCCTATCAGAGATGATAATGATCGTTCAAACCCCGATGCCCATTATTCACCTTCTGCTTCTCAACAAGCTCTTGATACTGCACATAATCACCAAATAATGAGGGGAGAATGGGCTGCTATTCGCATTCAAACAGCATTTCGAGGATTCCTGGCCAGAAGAGCACTTAGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCTGTGAGAAAACAAGCTGCAATAACATTGCGTTGCATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTCGGGCAAGGCGTGTCCGTTTGGCATTGGAGAGTCAAAATGAACAGCAGAAAGTTCAGCAGCAGCTTGCAAATGAAGCTCGTGTTCGAGAAATAGAAGAAGGCTGGTGTGACAGTGTGGGATCTGTAGAAGATATCCAAGCTAAAATATTGAAGAGGCAGGAGGCTGCAGCTAAACGTGAGAGAGCCATGGCATACGCTTTAGCTCATCAGTGGCAGGCAGGATCAAGACACCAGGCTGCTTCATCTGGATTTGAACCAGATAAAAGTAGCTGGGGCTGGAATTGGTTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAATCGTTTTGTTGACACTAGTCTAAGGGAGGGAGCAATGGTGCATGAAAATGGAGCAATGGATGGTAAAAATGGAACTGGTTCTAACAGCAAACCAATTCTATCAAACAATCATCAAAACCCTGCAAGTCAGAAAACTGGACCGATTCTTTCCAATGGTTGTGGTTCTTCACCTGGTAAGTCACCAGGCTTGCAGGAATCGTCGAACACGCAGGCTGCTAAGCCAAATGGTGAAAATGCTATTGAAGAAGCCAATTCAAAACCCAGGATTGGGTCAAGATCTCGTAGTAATCCAAAGGAGAGAACCTCACAAGCAGATAAGCAGGCCAAAAAACGATTATCTCTTCCTAACAGCGCAGGGGGAGGTCCTGGGGCTCAAACAGCAAGACATCCTAATAGAACAAATGTCAAAGGGACGCCCAATGTGCAAAAGCCTGGTAGGGATAAACCTAATGCCAACGGAAGAGGGAATGTAAATCTTACTCAGTCAGTCCCACAGCATGCAGGTATGTAG 1287 0.4553 MGVSGKWIRSLIGLKKSVKAESSEKDQNKVGKSRHQRKHSVQFDNGKLQNDLDDDVTLPIRDDNDRSNPDAHYSPSASQQALDTAHNHQIMRGEWAAIRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESQNEQQKVQQQLANEARVREIEEGWCDSVGSVEDIQAKILKRQEAAAKRERAMAYALAHQWQAGSRHQAASSGFEPDKSSWGWNWLERWMAVRPWENRFVDTSLREGAMVHENGAMDGKNGTGSNSKPILSNNHQNPASQKTGPILSNGCGSSPGKSPGLQESSNTQAAKPNGENAIEEANSKPRIGSRSRSNPKERTSQADKQAKKRLSLPNSAGGGPGAQTARHPNRTNVKGTPNVQKPGRDKPNANGRGNVNLTQSVPQHAGM 428
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc121070g00004 428 Gene3D - 94 135 - -
Stsc121070g00004 428 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Stsc121070g00004 428 MobiDBLite consensus disorder prediction 412 428 - -
Stsc121070g00004 428 MobiDBLite consensus disorder prediction 18 69 - -
Stsc121070g00004 428 MobiDBLite consensus disorder prediction 275 428 - -
Stsc121070g00004 428 ProSiteProfiles IQ motif profile. 94 121 IPR000048 GO:0005515
Stsc121070g00004 428 PANTHER IQ-DOMAIN 5-RELATED 1 379 - -
Stsc121070g00004 428 MobiDBLite consensus disorder prediction 351 366 - -
Stsc121070g00004 428 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Stsc121070g00004 428 MobiDBLite consensus disorder prediction 70 85 - -
Stsc121070g00004 428 MobiDBLite consensus disorder prediction 18 85 - -
Stsc121070g00004 428 FunFam IQ-domain 11 92 143 - -
Stsc121070g00004 428 MobiDBLite consensus disorder prediction 280 334 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc121070g00004 Stsc-Chr121070 32797 37650 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121070g00004 1 413 IQD Protein Family AT3G22190 56.872 1.41e-120 355
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121070g00004 - - gmx:100787148 542.732