Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc121070g00003 | ATGTTTGGGAGGGCGCCAAAGAAGAGCGATAACACCAAGTACTATGAGATCCTCGGAGTATCGAAGGACGCTTCTCAGGACGATTTGAAGAAGGCTTACAAGAAAGCCGCCATCAAGAATCATCCTGACAAAGGAGGTGACCCTGAGAAGTTTAAAGAGCTGGCACATGCTTATGAGGTGCTGAGTGACCCAGAGAAGCGTGAGATTTATGATCAATATGGCGAAGATGCACTTAAGGAAGGAATGGGTGGCGGTGGCGGAGGCCATGATCCATTTGATATCTTCCAGTCTTTCTTCGGTGGGAGTGCATTTGGCTCTGGTGGTGGCAGTAGAGGACGGAGGCAGAGACGCGGAGAGGATGTGGTTCACCCCCTGAAGGTCTCTTTGGAGGACCTTTACCTTGGGACTTCCAAGAAGCTCTCGCTTTCACGGAATGTCTTGTGCTCTAAATGCAACGGGAAAGGGTCGAAATCTGGAGCTTCAATGACATGTGCTGGCTGTCAAGGTACTGGTATGAAGGTTTCTATTAGGCATCTTGGTCCCTCTATGATTCAGCAAATGCAGCATCCTTGCAATGAATGCAAGGGTACCGGAGAAACAATCAATGAGAAAGACCGGTGCCCACAATGCAAGGGTGAGAAGGTTGTCCAAGAGAAGAAAGTGCTTGAGGTTCATGTGGAGAAGGGAATGCAGAACGGGCAGAAGATTACATTCCCTGGTGAAGCTGATGAAGCACCTGATACAGTCACAGGAGATATTGTCTTTGTCCTTCAACAGAAGGAACACCCCAAGTTCAAGAGAAGGGATGAAGACCTCTTTGTTGAGCACTCGCTGTCCCTGACCGAGGCTTTGTGTGGCTTCNNNNNNNNNNTTTGTGCTCACTCACTTGGATGGCCGGCAACTTCTTATCAGGTCGAATCCTGGAGAAGTTATTAA | 936 | 0.4829 | MFGRAPKKSDNTKYYEILGVSKDASQDDLKKAYKKAAIKNHPDKGGDPEKFKELAHAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFQSFFGGSAFGSGGGSRGRRQRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVLCSKCNGKGSKSGASMTCAGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINEKDRCPQCKGEKVVQEKKVLEVHVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRRDEDLFVEHSLSLTEALCGFXXXXCAHSLGWPATSYQVESWRSY | 311 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc121070g00003 | 311 | CDD | DnaJ | 14 | 63 | IPR001623 | - | |
Stsc121070g00003 | 311 | Gene3D | - | 148 | 214 | - | - | |
Stsc121070g00003 | 311 | FunFam | dnaJ protein homolog | 10 | 110 | - | - | |
Stsc121070g00003 | 311 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 119 | 263 | IPR008971 | GO:0006457|GO:0051082 | |
Stsc121070g00003 | 311 | SUPERFAMILY | DnaJ/Hsp40 cysteine-rich domain | 145 | 217 | IPR036410 | - | |
Stsc121070g00003 | 311 | CDD | DnaJ_zf | 148 | 214 | IPR001305 | GO:0031072|GO:0051082 | |
Stsc121070g00003 | 311 | ProSiteProfiles | Zinc finger CR-type profile. | 135 | 219 | IPR001305 | GO:0031072|GO:0051082 | |
Stsc121070g00003 | 311 | Pfam | DnaJ central domain | 148 | 214 | IPR001305 | GO:0031072|GO:0051082 | |
Stsc121070g00003 | 311 | PRINTS | DnaJ domain signature | 15 | 33 | IPR001623 | - | |
Stsc121070g00003 | 311 | PRINTS | DnaJ domain signature | 66 | 85 | IPR001623 | - | |
Stsc121070g00003 | 311 | PRINTS | DnaJ domain signature | 46 | 66 | IPR001623 | - | |
Stsc121070g00003 | 311 | Gene3D | DnaJ domain | 10 | 110 | IPR036869 | - | |
Stsc121070g00003 | 311 | FunFam | Chaperone protein dnaJ 3 | 215 | 255 | - | - | |
Stsc121070g00003 | 311 | Pfam | DnaJ C terminal domain | 122 | 287 | IPR002939 | - | |
Stsc121070g00003 | 311 | SUPERFAMILY | Chaperone J-domain | 8 | 110 | IPR036869 | - | |
Stsc121070g00003 | 311 | Gene3D | - | 111 | 260 | - | - | |
Stsc121070g00003 | 311 | PANTHER | DNAJ-LIKE-2, ISOFORM A-RELATED | 11 | 288 | IPR044713 | GO:0006457|GO:0030544 | |
Stsc121070g00003 | 311 | FunFam | DnaJ subfamily A member 2 | 148 | 214 | - | - | |
Stsc121070g00003 | 311 | ProSitePatterns | Nt-dnaJ domain signature. | 51 | 70 | IPR018253 | - | |
Stsc121070g00003 | 311 | ProSiteProfiles | dnaJ domain profile. | 13 | 74 | IPR001623 | - | |
Stsc121070g00003 | 311 | CDD | DnaJ_C | 119 | 287 | - | - | |
Stsc121070g00003 | 311 | Pfam | DnaJ domain | 13 | 71 | IPR001623 | - | |
Stsc121070g00003 | 311 | SMART | dnaj_3 | 12 | 66 | IPR001623 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc121070g00003 | Stsc-Chr121070 | 26367 | 28845 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc121070g00003 | 14 | 73 | C2H2 Transcription Factor Family | AT1G74250 | 44.928 | 4.03e-12 | 65.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc121070g00003 | K09503 | - | twl:120002231 | 495.352 |