Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121070g00002 ATGGACCATCTCTTGATCCACAAGTTCCGCCGCCGCTTACTTGCATGGCTTCACCGATCTCGTTCCGGTAGGGTATTCTTTGTGAGGAGAATTCCGTACAAGGATGTCAAAAGGGCAACTGATGGTTTTCAGAGAGTCATTTATAGCAACTCTGAAGTTACTGCATATGCTGCCAGGTTTGGGGAGGGTGGTGGTGGTGTGTTCTTGGTCAAAGAAGTGAAAGATTTTGGTCAACAAAATGATATTTTCTGCAGACAAATTCAATTCTTGGGGCGCTTGCATCATCGCCATCTTCTCTCCCTCAAAGGGTTTTCCGTAGGACAAGATAAGAGACTGCTCATATTCGATAACATAGAGAATGGAAGCTTAAAGGAGCATCTCAATGATCCCTTAAAGACTCCCTTAAATTGGAGGACGAGGTTGCAGATTGCTAATGATGTTGTGGCAGCACTGGAATACTTGTTTCTTTTCAGCAATCCACCAGCATATCATGTCTCTATCAGCTCAAGCAACATTATGTTAGATGAGAACTTTGCAGCTAAACTATCAGATTTTCGCCTTCTTACTCCCAGTGAGAATTCTGTCATGATGCCGAATTCAGAAGATAGCATGAAGCAGAAGAGTTGCAAGATAATATTCCAACTTGGAGTGCTGATACTGGAACTGGTCACCGGCCAGTCTTCAGAGATGGAAGGTNNNNNNNNNNCGGTTTTACAATTCCATAGATAA 729 0.4266 MDHLLIHKFRRRLLAWLHRSRSGRVFFVRRIPYKDVKRATDGFQRVIYSNSEVTAYAARFGEGGGGVFLVKEVKDFGQQNDIFCRQIQFLGRLHHRHLLSLKGFSVGQDKRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLQIANDVVAALEYLFLFSNPPAYHVSISSSNIMLDENFAAKLSDFRLLTPSENSVMMPNSEDSMKQKSCKIIFQLGVLILELVTGQSSEMEGXXXXVLQFHR 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121070g00002 242 ProSiteProfiles Protein kinase domain profile. 33 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121070g00002 242 FunFam Protein kinase superfamily protein 17 116 - -
Stsc121070g00002 242 Gene3D Transferase(Phosphotransferase) domain 1 119 239 - -
Stsc121070g00002 242 PANTHER OS01G0253100 PROTEIN 28 228 - -
Stsc121070g00002 242 SUPERFAMILY Protein kinase-like (PK-like) 25 227 IPR011009 -
Stsc121070g00002 242 Gene3D Phosphorylase Kinase; domain 1 17 116 - -
Stsc121070g00002 242 FunFam Protein kinase superfamily protein 118 208 - -
Stsc121070g00002 242 Pfam Protein tyrosine and serine/threonine kinase 69 192 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121070g00002 Stsc-Chr121070 22674 25870 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121070g00002 23 232 Receptor kinase-like Gene Family AT3G19300 39.655 1.43e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Stsc121070g00002 PK_Tyr_Ser-Thr 9.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121070g00002 - - gmx:100791979 331.257