Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121067g00003 ATGGAGGGTAGTAGAAGAACAAGCTCAAATTCAGAGCTGCCACCAGGGTTCAGGTTTCACCCAACTGATGAAGAACTAATTGTTCACTACCTTTGTAACCAAGCCACTTCAAAACCTTGCCCTGCTTCCATCATCCCTGAAGTTGATATCTATAAGTTTGATCCATGGCAATTACCCGAAAAAACAAGCTTTGGAGAGAATGAATGGTACTTCTTTAGTCCAAGGGATAGGAAGTACCCAAATGGGGTTCGGCCAAATAGGGCAACGGTTTCAGGGTATTGGAAGGCAACTGGTACGGACAAAGCTATCTATAGTGGCTCTAAGCATGTTGGGGTCAAGAAAGCTTTGGTCTTTTACAAGGGTAGGCCCCCAAAGGGTCTCAAGACTGATTGGATCATGCATGAATATAGATTGATTGGTTCAAGAACACAACCTACTAAACAAATTGGATCCATGAGGCTTGATGACTGGGTGTTATGTAGGATCTACAAGAAGAGGAGCATGGCAAAATCAATGTTATTGGAGCCTAAAGAGGAATATCCAACAACAATCAATTATCATCATCTAACATCATCATCAAATGATGGAAATGATAATAATAACAACAATAATGATAATGATGATGAGCAACAAGAAATGATGATGAAATTCCCAAGGACATGTTCCCTTACACATCTTTTGGAAATGGACTACTTGGGCCCAATTTCACACATACTATCTGATGGATCATATAACTCAACCTTTGATTTTCAACTAAATAATGCCAATGTTGGGAATATGATTATGGACCCTTTTGTTAAACAACAACCTCATCAGATCCTTGACATCCCTAACAAAAATAATTATTATGCTGTGGATTCAGGGAAGAACAACAACAACAACCACCTAGTGAAACAGAATAGCACCATAAACCCTACCATATTTGTGAGCCAATTCTTTGATCATAGTGGTTAA 954 0.391 MEGSRRTSSNSELPPGFRFHPTDEELIVHYLCNQATSKPCPASIIPEVDIYKFDPWQLPEKTSFGENEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHVGVKKALVFYKGRPPKGLKTDWIMHEYRLIGSRTQPTKQIGSMRLDDWVLCRIYKKRSMAKSMLLEPKEEYPTTINYHHLTSSSNDGNDNNNNNNDNDDEQQEMMMKFPRTCSLTHLLEMDYLGPISHILSDGSYNSTFDFQLNNANVGNMIMDPFVKQQPHQILDIPNKNNYYAVDSGKNNNNNHLVKQNSTINPTIFVSQFFDHSG 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121067g00003 317 Gene3D NAC domain 22 169 IPR036093 GO:0003677|GO:0006355
Stsc121067g00003 317 MobiDBLite consensus disorder prediction 187 209 - -
Stsc121067g00003 317 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 220 - -
Stsc121067g00003 317 SUPERFAMILY NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Stsc121067g00003 317 ProSiteProfiles NAC domain profile. 13 165 IPR003441 GO:0003677|GO:0006355
Stsc121067g00003 317 FunFam NAC transcription factor 22 169 - -
Stsc121067g00003 317 MobiDBLite consensus disorder prediction 187 208 - -
Stsc121067g00003 317 Pfam No apical meristem (NAM) protein 14 138 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121067g00003 Stsc-Chr121067 11612 13676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121067g00003 7 238 NAC Transcription Factor Family AT1G69490 70.213 2.30e-117 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc121067g00003 NAM 2.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121067g00003 - - adu:107489303 538.495