Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121064g00010 ATGTCCGAGGTTTGGTCATCTCTGAAGAAGTCACTTCACTGCAAGCCTCACTCAACGGAAGTTCATGATCCCATGACAAGTAGAAGAAGACAGCAGCACCATAGAAAGAAAACGAAGCAAGGCAAAGTCATAGAAGGTTCAAATAATAATAATAATTCAGAGAAACAGCATAGTCGTTGTCTTGGTGGAATCATCCATGACCGTGTTACACATGATATTGTCGTTGATGCCAAGAGCGGAAAAATTAAGATTTGTCCATGTCATCCTCATACTCAAGAAGAAGATGGTGGTAACAAAGGGTTGGAAGGATCATCAAATGCATCAACAAGAAGAGCTATGTCTTTGACGAAAACAGAGTGTGTTGATTGTTACCAGTGCAATGGTTTCTTAAAGCAAAGGGCTCCGGTGCACAAAGGTTCTGATAATGTTCCTCTAACATCAGCATGTCATCGTCATCAATGTTGTCATATACAAGAAAAATGCGCTGATGAAGACCACAGCATCAATGAGAATTCAGCTGTGCAACTTGACAAAGAAGATTTATCTTGGAAGATCATAGAAAGAATTTGCCAAACCAAGAATACGAACCTTGGAACTGAGATAGAATGTGTCTTAAAAGTTCACACCACAGCAAAAACACTTGCTTCCTTTGAAGAATGCAGAGAAAATGTGAGAAACATAGTTGAGAACATGCAACCTCGTTGCATAGCTGATGGAAATGAAGTCATGAGGTTTCATGGAACAACCATTGCATGCTCCCTTGGTGTAGTAAATTACCCTTCTGTCCTCTGCACTTTAGAACCATGTGGTTTGTGCCAAATTCTGAGGCATGGTTTCAAGGCAAACCAAGAATTATTCCATGGTGAACATGGGGTTCTCACCACTGCTACAAGTGATCAAGCCCTTGATTCCATTATTTTAACTGAATCATCTGAAAATGACAAAGCATTACCGTTGTTGAAGAAGTGCGTTATAGTGTGCAGAGTAATTGCTGGAAGAGTTCATAACCCTTTGCAAGAGATTCAGGAAGAGACTGATTCAGGTTTTGATTCATTGGTCAAGAAAATAAGCTCTGACTCAGATATTGAACAACTATTTATTTTAAAACCTGGAGCTATATTACCTTGCTTTGTGCCTAGAACCCTAAACCAAACCCTCGGAGACACTCTCCACTCTCCAGCTGTGCTCGCCTCTGCTTCTCCGCCATATCTTCCGCTTTCCCTCTCTCCTTCGGCTGCTGCTGCTGGAATTGTCGTTGGAGGCCTTGTTCTTGTTGCTGCTGCCTGCGTGGGTGCTGCTGCAGTTGTAATTTTATCTGCATTTTGGTGCTTGAAGGAGTCGGGAGATTTTAATTTTGCCTTTAGCTGTTCGGGTACAAAAATGCCCAGAAGGCCAACAAGGCATTGCCAACGACCCAGAACTTTGCCATTTGCATTCTCCCCTTTTGCTCGTTCTCTTGCTCGAATGGCCTCACCTTCTATGCCCAAACGGCAACAGCAACATTCCAAATTTGATGAAAAGCCTACACCTCCTAGTAAGTCCTCATTAAAGGAGAAAGCCGAAGAATATGAGTCCTCCGATGAGGAGTTTGAAGGAGTTGTCCAAGCAGACTTTTCCTTTTTTGATCCTAAACCCAATGACTTTCATGGAGTGAAGACCTTGCTGCAAACTTACCTGGATGATAAGGAATGGGATTTAAGTGGATTTGTAGATTTAATTTTGGCGCAGACTACAGTAGGCACCGTTGTAAAGATAGAGGATGATGAGGATGAAGGGCTTTTTGCTGTTGTTAGTGCTCTTAATTTGTGGAGATATAGGGAACAAAAATGCATTACCGATGTTAAGGAATTTCTCCTATCCAAAGCACACCAAGAGAAGGGTATTGCAGATAAGTTGAGGTTACTTTTAGAAGAACAAGCACGTGACATAGGTATCTTGGTATCACAGCGTGTGTTGAACCTTCCTCCGCAACTCTTGCCACACCTTTATGAAGCACTTTTTGACGAGGTGTCATGGGCTACGGAAGATGAGGTTAGATGTCAGTGGTATCAGATTGGTGAGGGTGTTAAAATGTGTTTCTATCTAACCACAGGTGACTAA 2100 0.4214 MSEVWSSLKKSLHCKPHSTEVHDPMTSRRRQQHHRKKTKQGKVIEGSNNNNNSEKQHSRCLGGIIHDRVTHDIVVDAKSGKIKICPCHPHTQEEDGGNKGLEGSSNASTRRAMSLTKTECVDCYQCNGFLKQRAPVHKGSDNVPLTSACHRHQCCHIQEKCADEDHSINENSAVQLDKEDLSWKIIERICQTKNTNLGTEIECVLKVHTTAKTLASFEECRENVRNIVENMQPRCIADGNEVMRFHGTTIACSLGVVNYPSVLCTLEPCGLCQILRHGFKANQELFHGEHGVLTTATSDQALDSIILTESSENDKALPLLKKCVIVCRVIAGRVHNPLQEIQEETDSGFDSLVKKISSDSDIEQLFILKPGAILPCFVPRTLNQTLGDTLHSPAVLASASPPYLPLSLSPSAAAAGIVVGGLVLVAAACVGAAAVVILSAFWCLKESGDFNFAFSCSGTKMPRRPTRHCQRPRTLPFAFSPFARSLARMASPSMPKRQQQHSKFDEKPTPPSKSSLKEKAEEYESSDEEFEGVVQADFSFFDPKPNDFHGVKTLLQTYLDDKEWDLSGFVDLILAQTTVGTVVKIEDDEDEGLFAVVSALNLWRYREQKCITDVKEFLLSKAHQEKGIADKLRLLLEEQARDIGILVSQRVLNLPPQLLPHLYEALFDEVSWATEDEVRCQWYQIGEGVKMCFYLTTGD 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121064g00010 699 MobiDBLite consensus disorder prediction 499 521 - -
Stsc121064g00010 699 MobiDBLite consensus disorder prediction 13 27 - -
Stsc121064g00010 699 MobiDBLite consensus disorder prediction 490 521 - -
Stsc121064g00010 699 MobiDBLite consensus disorder prediction 43 57 - -
Stsc121064g00010 699 PANTHER BRCA2 AND CDKN1A INTERACTING PROTEIN 462 695 IPR025602 -
Stsc121064g00010 699 Gene3D - 163 379 - -
Stsc121064g00010 699 MobiDBLite consensus disorder prediction 1 57 - -
Stsc121064g00010 699 SUPERFAMILY ADP-ribosylation 174 379 - -
Stsc121064g00010 699 Pfam BCCIP 534 677 IPR025602 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121064g00010 Stsc-Chr121064 58545 64298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121064g00010 162 378 C2H2 Transcription Factor Family AT5G54630 44.889 5.35e-53 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121064g00010 K15262 - ahf:112735647 513.072