Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121064g00007 ATGAAGAGGGAGCACCACCATCTACAATCCAACCTACGCGATCCCTCACCCTCTTCCATGCCCACACCACCACCACCTTCATCTGCACCACAACCCACTTCCGCCGCCGGCGCTTATTCCGGTTACTCAATCCCCAACGGCACAACCTCTGCTGACGGCGGCATGGACGAGCTGCTGGCGGTGGTTGGTTACAAGGTGAGGTCCTCCGATATGGCGGAAGTTGCGCAGAAGCTTGAGCAGCTGGAGGAAGCCATGGGGAACGCACAGGACGGAATCTCCCAACTCTCCAACGACACCGTTCACTTCAACCCCGCAGATATCTCCAACTGGCTCGAAACCATGATCAGCAATCTAGACTTGCCGCCTCCTCCTCCTCCTCCTCCTTTGCCGCAGCAACACTCCGTCGACTCCTCATCCTCCTCCGCTGCTTTCCTCCCCCAAACTGAATCCTCCACCATCACAACTTCCATGGATAGGGCCTTCGAGGACAGCTCCTCCTCCGACTACGACCTCAAGGCCATCGCAGCCAAGGCAATATACACCACCGCCTCCGCCTCCGCCGATTCCCTATCTCCTTCCTCCAAGCGCGTGAAACCCTCGCCTGCCGAGTCGTCCTCCTCGACTCGGCCACTCGTCCTGGTTGACTCGCAGGAGAATGGGATCCGACTCGTCCACACACTCATGGCGTGCGCGGAGGCAGTCCACCAGAACAACCTGCCTCTGGCGGAGGCGCTGGTAAAGCAGATCGGATTCTTGGCGGTGTCTCAGGTTGGAGCCATGCGCAAAGTAGCCACCTACTTCGCCGAAGCCCTCGCTCGCCGGATCTACGGTCTATACCCGGAGAACCCGATCCAACATTCGTTCTCCGATATGCTTCAGATCCACTTCTACGAGACCTGTCCCTACCTCAAGTTCGCTCACTTCACAGCCAACCAAGCCATCCTCGAAGCGTTCCAGGGAAAGAATCGCGTCCACGTCATCGATTTCAGCATGAACCAGGGGATGCAGTGGCCAGCGCTCATGCAAGCCCTTGCTCTCCGTCCAGGAGGTCCGCCAGCGTTCCGTTTAACCGGAATCGGACCTCCGGCGGCGGACAACTCCGATCACTTGCAGGAAGTAGGTTGGAAACTAGCTCAATTAGCCGAGACGATCCACGTCGAGTTCGAGTACAGAGGATTCGTCGCCAACAGCTTGGCAGATCTTGACGCCTCCATGCTGGAGCTGAGGCCGAGCGAGACCGAGTCGGTGGCGGTTAACTCGGTTTTCGAGCTGCACAAGCTGCTCGCTCGTCCCGGCGCGGTGGAGAAGGTTCTGTCGGTGGTGAGGCATATCCGGCCGGAGATCGTGACGGTGGTGGAGCAGGAGGCGAACCACAATGGACCGGGTTTTATGGACCGGTTCACGGAGTCGCTGCACTACTACTCCACCATGTTCGACTCGCTTGAGGGTTCGGTAAACTCGCAGGACAAGTTGATGTCGGAGGTGTACCTGGGAAAACAGATCTGCAACGTGGTAGCTTGCGAAGGGGTGGACCGGGTGGAGAGGCACGAGACCCTGGGTCAGTGGCGTACCCGGTTTGGTTCTTCTGGGTTCGCACCGGTCCACCTGGGTTCAAATGCCTTCAAGCAAGCGAGCATGTTGCTAGCACTGTTTGCGGGTGGGGATGGCTACAGAGTGGAAGAGAATAACGGTTGCCTCATGCTTGGTTGGCATACTAGACCCTTGATTGCCACCTCTGCGTGGCAACTCGCCACCAAATCGGTGGTTGCTCACTGA 1776 0.5822 MKREHHHLQSNLRDPSPSSMPTPPPPSSAPQPTSAAGAYSGYSIPNGTTSADGGMDELLAVVGYKVRSSDMAEVAQKLEQLEEAMGNAQDGISQLSNDTVHFNPADISNWLETMISNLDLPPPPPPPPLPQQHSVDSSSSSAAFLPQTESSTITTSMDRAFEDSSSSDYDLKAIAAKAIYTTASASADSLSPSSKRVKPSPAESSSSTRPLVLVDSQENGIRLVHTLMACAEAVHQNNLPLAEALVKQIGFLAVSQVGAMRKVATYFAEALARRIYGLYPENPIQHSFSDMLQIHFYETCPYLKFAHFTANQAILEAFQGKNRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNSDHLQEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRPSETESVAVNSVFELHKLLARPGAVEKVLSVVRHIRPEIVTVVEQEANHNGPGFMDRFTESLHYYSTMFDSLEGSVNSQDKLMSEVYLGKQICNVVACEGVDRVERHETLGQWRTRFGSSGFAPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQLATKSVVAH 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121064g00007 591 MobiDBLite consensus disorder prediction 32 50 - -
Stsc121064g00007 591 MobiDBLite consensus disorder prediction 118 132 - -
Stsc121064g00007 591 Gene3D - 54 118 IPR038088 -
Stsc121064g00007 591 MobiDBLite consensus disorder prediction 17 31 - -
Stsc121064g00007 591 MobiDBLite consensus disorder prediction 116 159 - -
Stsc121064g00007 591 Coils Coil 71 98 - -
Stsc121064g00007 591 MobiDBLite consensus disorder prediction 133 159 - -
Stsc121064g00007 591 MobiDBLite consensus disorder prediction 1 51 - -
Stsc121064g00007 591 FunFam DELLA protein GAI 54 118 - -
Stsc121064g00007 591 ProSiteProfiles GRAS family profile. 214 582 IPR005202 -
Stsc121064g00007 591 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 176 578 IPR005202 -
Stsc121064g00007 591 MobiDBLite consensus disorder prediction 188 209 - -
Stsc121064g00007 591 SMART DELLA_2 56 128 - -
Stsc121064g00007 591 Pfam GRAS domain family 223 582 IPR005202 -
Stsc121064g00007 591 Pfam Transcriptional regulator DELLA protein N terminal 56 122 IPR021914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121064g00007 Stsc-Chr121064 39227 41002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121064g00007 52 585 GRAS Transcription Factor Family AT2G01570 68.246 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc121064g00007 GRAS 6.3e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121064g00007 K14494 - qsa:O6P43_032550 848.966