Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121063g00005 ATGGAGTATCTAACCCTTCTTTTAACCTTCTTATTTGTGTGTGCAGTTATTCATCTTCTACTATCCAATTTAGGAATCAAAAGACAAAAATCTACCAAACTTCCACCAGGACCAAAACCTTTACCCATCATAGGAAACATTTTGGAACTTGGTACCCAACCTCACCAATCACTTACTAAGCTTTCTCAAACTTATGGACCAATAATGACTCTTAGGCTTGGTAACATAACCACCATAGTTATTTCATCTCCGCAACTAGCCAAAGAAGTTCTCCTTAAAAATGACCAAGTTTCCTCTTATAGAGCAGTTCCGGATACCCTTCACGCACTTGATCACAACATCTATTCGCTTGGATGGATGCAACCTTCAAATCAATGGAAGATTCTTCGGAGAGTTTGCGCTACCAAAGTGTTCTCTTCGCAGCAGCTTGATTCCACGCAAGTTCTTCGACGAAGGAAAGTGCAAGAGCTTATGGATTTTGTAAAAGAAAAAAGTGAAAAAGGAGAAGCCTTGGATATCGGTGAGACTGTTTTTACAACTGTGCTTAATTTCATATCGAACACTTTCTTTTCGATGGATTTGGGTGATTTCAATTCTCCTAAATCTCTAGAGTTTAAGGAGAACTTTTGTTCAATCAATGATGAAGCCGGAAAACCTAATATTGTGGACTTCTTCCCAATCCTTCGCTTGCTTGATCCACAAGGTGCTCGTGCAAGAATGACCAAGTATTTTAGAAAGTTGATAAATTTTTTTGATGGTCTTGTAGAAGAAAGGTTGCAATCAAGGTCTCTAGAAAAGAAAACCAAAGCATGCAAAGATGTGTTAGATTCTTTGTTAGAAGTTATGTTGGAAGAGAATTCTCAAGTGACTCGACTCCATGTGCTGCATTTGTTTTTGGTTTTAATAGTCGCCGGAGTGGAAACAACATCAATCACCATAGAATGGGCAATGGCAGAGCTATTAAGAAACCCAGAAAAGCTTGAAAAAGTTAGAAACGAACTTCAACACGCCCTTGGAAAAAATGAACAACTTGAAGAAAAACACATTTCAAAGCTTCCATTTCTTAAAGCAGTTGTGAAAGAAACCTTTCGGTTGCACCCACCTGCCCCATTTTTAGTACCACACCAATCACAAGAGGATGTTGAACTATGTGGCTTCATTGTGCCTAAAAATTCACAAGTTTGGGTTAATGTATTTGCTATGGGAAGAGATGCAAGTATTTGGACAAACCCTAATGAATTCATGCCTGAAAGATTCTTAGAGAGTGAGATTGATTTTCAAGGCCGCGATTTCGAGCTGATTCCGTTTGGTGCGGGGAGAAGAATGTGTCCGGGATTGCCACTGGCTTATAGAGGAGTGCACATTGTGTTGGCATCACTTCTTCATGGCTATGATTGGAAGGTAGCAAATTTAAATGGACAAAAGGAAGAGGATTTGGATATGGCTGATAAATATGGACTTACTTTGCGTAAGGCTCAACCTCTCCAAGCTATTCCAATACATTCTTGA 1509 0.3923 MEYLTLLLTFLFVCAVIHLLLSNLGIKRQKSTKLPPGPKPLPIIGNILELGTQPHQSLTKLSQTYGPIMTLRLGNITTIVISSPQLAKEVLLKNDQVSSYRAVPDTLHALDHNIYSLGWMQPSNQWKILRRVCATKVFSSQQLDSTQVLRRRKVQELMDFVKEKSEKGEALDIGETVFTTVLNFISNTFFSMDLGDFNSPKSLEFKENFCSINDEAGKPNIVDFFPILRLLDPQGARARMTKYFRKLINFFDGLVEERLQSRSLEKKTKACKDVLDSLLEVMLEENSQVTRLHVLHLFLVLIVAGVETTSITIEWAMAELLRNPEKLEKVRNELQHALGKNEQLEEKHISKLPFLKAVVKETFRLHPPAPFLVPHQSQEDVELCGFIVPKNSQVWVNVFAMGRDASIWTNPNEFMPERFLESEIDFQGRDFELIPFGAGRRMCPGLPLAYRGVHIVLASLLHGYDWKVANLNGQKEEDLDMADKYGLTLRKAQPLQAIPIHS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121063g00005 502 Pfam Cytochrome P450 35 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121063g00005 502 CDD CYP76-like 62 499 - -
Stsc121063g00005 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Stsc121063g00005 502 Gene3D Cytochrome P450 21 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121063g00005 502 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121063g00005 502 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121063g00005 502 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121063g00005 502 SUPERFAMILY Cytochrome P450 28 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121063g00005 502 Coils Coil 327 347 - -
Stsc121063g00005 502 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121063g00005 502 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121063g00005 502 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121063g00005 502 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121063g00005 502 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121063g00005 502 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121063g00005 502 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121063g00005 502 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121063g00005 502 FunFam Cytochrome P450 76C4 26 498 - -
Stsc121063g00005 502 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121063g00005 Stsc-Chr121063 39153 41813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121063g00005 5 500 Cytochrome P450 AT2G45550 45.817 5.84e-163 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121063g00005 - - gmx:100779789 686.026