Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121059g00010 ATGGCTGTTGTCCAAGCCAACAACTTACTGGAGGATCAGAGCTCTATCAGATCAGGAAGTTTGAGCACGAATGAGTCCGGCCCGTTCGGCACCTTTGTTGGTGTCTATGACGGCCATGGAGGGCCGGAGACATCAAGATTTATCAATGACCATCTAGTTCACCATCTTAAGAGGTTTAGTGCAGAGCAACAATCAATGTCAGTAGATGTAATTCGCAAATCGTTCCAAGCGACGGAGGAAGGATTTACATCCCTAGTTGCCACACAATGGTCGATGAAGCCGCAAATTGCAGCTGTTGGATCATGCTGTCTTGTTGGTGTTATATGCAATGGAACTCTTTATGTGGCGAATGTTGGCGATTCCCGGGCTGTTATGGGAAGAGCAGTTAAGGCAACTGGGGAAGTTTTGGCTGTGCAGTTGTCTGCCGAGCACAATGCATCGATAGAATCCGTAAGACAAGAGCTGAAATCTATGCACCCTGATGATTCACAGATTGTTGTTCTTAAGCATAATGTGTGGCGTGTGAAGGGTCTTATCCAAGTTTCTCGATCTATTGGCGATGTATATCTTAAAAAGGCCGAGTTCAACAGAGAACCTCTATATGCAAAGTTTCGCCTTCGTGAACCAATCAAGAAGCCTATATTGAGCTCAGAACCATCGATATCAGTGCACCAGTTGCAGCCGCAAGATCAGTTTGTTATATTCGCCTCTGATGGCCTTTGGGAGCACTTCAGTAATCAAGAGGCAGTGGATATAGTTCAACAAAATCCTCGCAATGGAATTGCAAGGAGGCTGGTTAAGATTGCCCTTCAAGAAGCAGCAAAGAAAAGAGAAATGAGATATTCAGACCTTAAAAAAATCGACCGTGGTGTTCGTCGCCATTTCCACGACGATATCACCGTGATTGTTGTGTTCATAGACTCGACTTTCGTGAGCAGGGCAACCTCCGTCAAGTTCCCGAGTATTTCTCTTAGAGGCGGCGGCGTCCACCTGCCTTCTAACACACTCGCACCGTGTACTACACCGACAGAGGCCGGCGCCACCTGA 1047 0.469 MAVVQANNLLEDQSSIRSGSLSTNESGPFGTFVGVYDGHGGPETSRFINDHLVHHLKRFSAEQQSMSVDVIRKSFQATEEGFTSLVATQWSMKPQIAAVGSCCLVGVICNGTLYVANVGDSRAVMGRAVKATGEVLAVQLSAEHNASIESVRQELKSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPIKKPILSSEPSISVHQLQPQDQFVIFASDGLWEHFSNQEAVDIVQQNPRNGIARRLVKIALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFIDSTFVSRATSVKFPSISLRGGGVHLPSNTLAPCTTPTEAGAT 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121059g00010 348 PANTHER PROTEIN PHOSPHATASE 4 304 IPR015655 GO:0004722|GO:0006470
Stsc121059g00010 348 Pfam Protein phosphatase 2C 31 275 IPR001932 -
Stsc121059g00010 348 SUPERFAMILY PP2C-like 8 307 IPR036457 -
Stsc121059g00010 348 ProSiteProfiles PPM-type phosphatase domain profile. 10 306 IPR001932 -
Stsc121059g00010 348 FunFam Phosphatase 2C family protein 1 316 - -
Stsc121059g00010 348 SMART PP2C_4 7 304 IPR001932 -
Stsc121059g00010 348 ProSitePatterns PPM-type phosphatase domain signature. 32 40 IPR000222 GO:0043169
Stsc121059g00010 348 CDD PP2Cc 1 306 IPR001932 -
Stsc121059g00010 348 Gene3D - 1 316 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121059g00010 Stsc-Chr121059 36948 39637 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121059g00010 1 347 PP2C-type Phosphatase Gene Family AT4G38520 76.369 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121059g00010 - K01102 rcu:8283668 602.823