Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121059g00009 ATGTTATCAGAGTTGATGAACTTTTGTAGGGCCTGCTTTCGGCCAGGTTCGGATAAGTATGGACATGGCGGTACGGATGCTGGAGGTAAGCAGGATGGACTATTGTGGTACAAAGACTACGGGCAGCACTTGCACGGCGAGTTTTCGATGGCTGTTGTCCAAGCCAACAACTTACTGGAGGATCAGAGCTCTATCAGATCAGGAAGTTTGAGCACGAATGAGTCCGGCCCGTTCGGCACCTTTGTTGGTGTCTATGACGGCCATGGAGGGCCGGAGACATCAAGATTTATCAATGACCATCTAGTTCACCATCTTAAGAGGTTTAGTGCAGAGCAACAATCAATGTCAGTAGATGTAATTCGCAAATCGTTCCAAGCGACGGAGGAAGGATTTACATCCCTAGTTGCCACACAATGGTCGATGAAGCCGCAAATTGCAGCTGTTGGATCATGCTGTCTTGTTGGTGTTATATGCAATGGAACTCTTTATGTGGCGAATGTTGGCGATTCCCGGGCTGTTATGGGAAGAGCAGTTAAGGCAACTGGGGAAGTTTTGGCTGTGCAGTTGTCTGCCGAGCACAATGCATCGATAGAATCCGTAAGACAAGAGCTGAAATCTATGCACCCTGATGATTCACAGATTGTTGTTCTTAAGCATAATGTGTGGCGTGTGAAGGGTCTTATCCAAGTTTCTCGATCTATTGGCGATGTATATCTTAAAAAGGCCGAGTTCAACAGAGAACCTCTATATGCAAAGTTTCGCCTTCGTGAACCAATCAAGAAGCCTATATTGAGCTCAGAACCATCGATATCAGTGCACCAGTTGCAGCCGCAAGATCAGTTTGTTATATTCGCCTCTGATGGCCTTTGGGAGCACTTCAGTAATCAAGAGGCAGTGGATATAGTTCAACAAAATCCTCGCAATGGAATTGCAAGGAGGCTGGTTAAGATTGCCCTTCAAGAAGCAGCAAAGAAAAGAGAAATGAGATATTCAGACCTTAAAAAAATCGACCGTGGTGTTCGTCGCCATTTCCACGACGATATCACCGTGATTGTTGTGTTCATAGACTCGACTTTCGTGAGCAGGGCAACCTCCGTCAAGTTCCCGAGTATTTCTCTTAGAGGCGGCGGCGTCCACCTGCCTTCTAACACACTCGCACCGTGTACTACACCGACAGAGGCCGGCGCCACCTGA 1194 0.4732 MLSELMNFCRACFRPGSDKYGHGGTDAGGKQDGLLWYKDYGQHLHGEFSMAVVQANNLLEDQSSIRSGSLSTNESGPFGTFVGVYDGHGGPETSRFINDHLVHHLKRFSAEQQSMSVDVIRKSFQATEEGFTSLVATQWSMKPQIAAVGSCCLVGVICNGTLYVANVGDSRAVMGRAVKATGEVLAVQLSAEHNASIESVRQELKSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPIKKPILSSEPSISVHQLQPQDQFVIFASDGLWEHFSNQEAVDIVQQNPRNGIARRLVKIALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFIDSTFVSRATSVKFPSISLRGGGVHLPSNTLAPCTTPTEAGAT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121059g00009 397 CDD PP2Cc 48 355 IPR001932 -
Stsc121059g00009 397 Gene3D - 37 365 IPR036457 -
Stsc121059g00009 397 SMART PP2C_4 41 353 IPR001932 -
Stsc121059g00009 397 FunFam Phosphatase 2C family protein 36 365 - -
Stsc121059g00009 397 PANTHER PROTEIN PHOSPHATASE 36 353 IPR015655 GO:0004722|GO:0006470
Stsc121059g00009 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Stsc121059g00009 397 Pfam Protein phosphatase 2C 80 324 IPR001932 -
Stsc121059g00009 397 SUPERFAMILY PP2C-like 55 356 IPR036457 -
Stsc121059g00009 397 ProSiteProfiles PPM-type phosphatase domain profile. 44 355 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121059g00009 Stsc-Chr121059 36948 39637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121059g00009 1 396 PP2C-type Phosphatase Gene Family AT4G38520 73.737 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121059g00009 - K01102 jre:109006616 682.174