Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121051g00005 ATGCTTGAAAGGTTGGATGATTGTCTGTGTGATGTTGAACCTGTGCTTGATGATGCTGAGCTGAAACAGTTTCGTAACGAGAGAGTGAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATATGGCTGATGACTTGCTCGATGAACTCTGCACTAAAGCTGCCACTGCCACTCCAAGGGATCCAGGTAACTCTTATAACTGGTTTCGCCCTGTTGATTTAATTATTGAAGATAGTGGTTCCAATCACATTGAAAAGATAGTTGGCACACTAGAGTCTGTTGTAGGACGAAAAGATAAACTTCGTTTGAAAGAGAGTGCCAAGGTGGACTTCTCGTCATGGAGAATTCCATCCACATCTCTCGTTGTTAGTTCTGACATATTTGGTCGAGACCAAGACAAGGAGAACATAATCAAATTGCTGTTGAATGATACCTGCGATGCTGAATCACCTGTGTCTGTGGTTCCCATTGTGGGTATGGGTGGGATAGGAAAAACTACTTTGGCTCAATTGGTTTACAATGATGCTAAAGTCATGGGAAAATTTGACACTAGAGCATGGGTGTGTGTTGCTGAAAATCCTGACCCTATTCATGTTACAAGGACAATAATAGGGGCAATAGATTCCTCTTCGTGTAATGTGGATCATTTTGATTCACTTCAGACTCATTTGAAGGAAAACTTGTTTGGAAAGACATTTTTAGTTGTTTTAGATGATGTATGGGAAGATGAACAAGATACGTGGGAGGAATTTTTAAAACCTTTTCGATACGGGAATAATGGGAGTAAGATTCTCCTAACAACCCGTAGTAAAAAGGTGGCTTCCATATTCGCAGCTAACAATCTACACTATGGACTAAGTTTATTGGCGGAGGAAGATTGTTGGTCAATGTTTTTGAAGCATTCATCTATTTCTACTGAATGTAAAGAATATGCAACTCTTGAACCAATTGGCAGAAAAATTGTTGAAAAGTGTAAAGGATTACCTTTGGCTGTCAAGACACTTGGGGGTTTATTGCGCAATAAATATGGTATAGGAGATTGGGAGAATATACTTGAAAGTGAAATTTGGGAACTCTCGGAGGATAAGAGTAAGATTGTTCCGGCACTAAGAGTTAGTTATCACTACCTCCCTTCACATTTAAAGCGTTGTTTTGTTTATTGCTCATTACATCCTAAAGATTATCAATTTGATAAAGACGAATTGATTTTGTTATGGATGGCCGAAGACCTTTTACAACCAACGAAAAATAACACATCAGAAAATATTGGTTGTGCTTATTTTGATGAATTAGTTGCAAGGTCATTTTTTCAACCTTCCAGTAAAAATGGGAAGTTATTTGTAATGCATGATCTCATGCATGATTTAGCAACGTATTTTGCTGGAAAATTCTATTTCAAACTCAAAGAATTTGGTGATCGACACAGGATAGACAACAAAACTCGTCATTTGTCATTTAATACATATTTTAATGATAGCCTCAAATTATTTCAAGAGGTCTCTAATAGGGCAGCACACATAAGAACAATGTTAAATAATCGACATTGTTATGAATCAATTGTTGTTAACAGCAATGCTTCGCTCTTACTACAACATTTGAGAGTTTTGTCAGTTGACTCATTTCCTATAACGTCATTGCCAGAATCAATTGGGGAACTGATCTATTTGCGTCATCTAGATTTTTCTGACACACTTATTGCTATATTGTCTGAGTCAATATGCAAATTATACAATCTCCAAACTTTGAAGTTGAGGAATTGTTATATGCTAGAGAGGCTTCCCAGCTGCATGCAAGATCTTGTGAATCTGCGCCACCTTGATATTCGAGGTATTTCTGGTCTTAAGGAGATGCCGAAGAAAATGAGTAAGCTAAAGCATCTAAACTTCTTTAATCATTATGTGGTCGGCAAGAATGATGATAGTGGGATAAGAGAATTGGGAACACTGGAAGATCTTCATGGCTCATTTTGCATTTCCAAGTTGGAGAATGTCAAGAACAGTGGTGAAGCTTTGGAGGCAAGGATGGGTAACAAGAAGCACATCAACACTTTAATATTGGTATGGAGTTCATATGGTGACATTGACGATCTTCATACTCAAAGAGATATACTTGACAAGTTACAACCTCATCAAAACTTGAAAATGTTATCAATTAAGGGTTATGGGGGTGAAACATTCCCAGATTGGTTAGGTCTTTCTTGTTACTCCAATATGACCACATTGATTCTGAATGGTTGTAAGAATTGTCGCGAGCTTCCTTCACTGGGACAGTTACCCTCTTTACAGCATCTGGAGATTTCTGATTTTGATGAGTTGGAGAAAATTGATTCAGAGTTTTTCAACAGAAACAGCGGATCATTCCAGCAGGAAACACCCTTCAGATCTCTTGAAACTCTGGAAATTAAGTCCATGTCTCGCTGGCAAGAGTGGCATTTCCCTGACATGTTGGATAGTTTTCCTCAGCTAAGAATCCTTTCAATAAGAAACTGTCCGATGTTACGGGGAGATCTGCCAGGTCACCTTCCGGCTCTGGAGGAACTTACCATTATAAGATGTGAAGAGCTTGCATGTTCGCTGCCGAGGGCTCCCAAGCTCCACCAATTATTTGTAGAGAGTTTTGTGTGGAATGAGGAACTGTACCATGCTCTAATTTCAGGAACCCCGCTGGCAAAGTCCGTATTGGAGTGCTTCGCCAACATCCAACAGCCACATATCCAACGTATGGTTATCAGTAACTGTCACCCAGCGATATCAATCTCTGGAGATTATTTGCCAGCTTCATTACAATTTCTGGTAATCTTTTGGTGTCCAAAATTCACATTCTCACAGCAACTGCATCACAAGTCGCTAACGGAGATAAAGATAGCGGGGTGCGGTTCACTGACGTTTCCATTGGGGGACCTTCCAAATCTCAAGAAGCTTGACTTATCATATTGCAAAAACATGGAATATGTTGAGGTGCCACTGCCACATGCTCTTCCAAGTCTCCTTTATTTAAGCATCTCACGTTGCCCCAGTTTAGTATCCTTGCCGCCGCTAGGGAGGGTTGCCCCCCGTCTCGAGGACCTGCGTATACACGACTGCCCAGAAATCGATTCTTTTGCTGAGGACTGCCTCCCGCCGAGTTTGAAAAATCTTTACGTCGCTGGGTGCCACAAGCTCACAAGTTGGATAGCATCAAAGGGTTTGCAGAGTGAAGGCCTTACCCATCTTGAGCTTCGCTATTGCAATGAGATAAAGTCATTCCCAAAAGAGGGTTGCCTTCCACCTTCTCTTGAGTCTCTACATTTGTGGGACTTACCCAATCTTGAGACGCTCCACTGCAACCATCTTACCTCTCTCAAATGTTTATCAATTAAATACTGTCACAACCTTGAGAACATCATACAAGAACATTTGCTTGCCTCCATTGAAAATATCTGCATAGGGAAAGAATGTCCTTTGAGGACTAAGCTGGAAGACATGGAACAACCACGGATTCAATTCATTCCAGACTCGGACCATGATCATAATGACCATTGA 3522 0.4043 MLERLDDCLCDVEPVLDDAELKQFRNERVKKWLVDLQDALYMADDLLDELCTKAATATPRDPGNSYNWFRPVDLIIEDSGSNHIEKIVGTLESVVGRKDKLRLKESAKVDFSSWRIPSTSLVVSSDIFGRDQDKENIIKLLLNDTCDAESPVSVVPIVGMGGIGKTTLAQLVYNDAKVMGKFDTRAWVCVAENPDPIHVTRTIIGAIDSSSCNVDHFDSLQTHLKENLFGKTFLVVLDDVWEDEQDTWEEFLKPFRYGNNGSKILLTTRSKKVASIFAANNLHYGLSLLAEEDCWSMFLKHSSISTECKEYATLEPIGRKIVEKCKGLPLAVKTLGGLLRNKYGIGDWENILESEIWELSEDKSKIVPALRVSYHYLPSHLKRCFVYCSLHPKDYQFDKDELILLWMAEDLLQPTKNNTSENIGCAYFDELVARSFFQPSSKNGKLFVMHDLMHDLATYFAGKFYFKLKEFGDRHRIDNKTRHLSFNTYFNDSLKLFQEVSNRAAHIRTMLNNRHCYESIVVNSNASLLLQHLRVLSVDSFPITSLPESIGELIYLRHLDFSDTLIAILSESICKLYNLQTLKLRNCYMLERLPSCMQDLVNLRHLDIRGISGLKEMPKKMSKLKHLNFFNHYVVGKNDDSGIRELGTLEDLHGSFCISKLENVKNSGEALEARMGNKKHINTLILVWSSYGDIDDLHTQRDILDKLQPHQNLKMLSIKGYGGETFPDWLGLSCYSNMTTLILNGCKNCRELPSLGQLPSLQHLEISDFDELEKIDSEFFNRNSGSFQQETPFRSLETLEIKSMSRWQEWHFPDMLDSFPQLRILSIRNCPMLRGDLPGHLPALEELTIIRCEELACSLPRAPKLHQLFVESFVWNEELYHALISGTPLAKSVLECFANIQQPHIQRMVISNCHPAISISGDYLPASLQFLVIFWCPKFTFSQQLHHKSLTEIKIAGCGSLTFPLGDLPNLKKLDLSYCKNMEYVEVPLPHALPSLLYLSISRCPSLVSLPPLGRVAPRLEDLRIHDCPEIDSFAEDCLPPSLKNLYVAGCHKLTSWIASKGLQSEGLTHLELRYCNEIKSFPKEGCLPPSLESLHLWDLPNLETLHCNHLTSLKCLSIKYCHNLENIIQEHLLASIENICIGKECPLRTKLEDMEQPRIQFIPDSDHDHNDH 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121051g00005 1173 Gene3D - 373 459 IPR036388 -
Stsc121051g00005 1173 PRINTS Disease resistance protein signature 966 982 - -
Stsc121051g00005 1173 PRINTS Disease resistance protein signature 325 339 - -
Stsc121051g00005 1173 PRINTS Disease resistance protein signature 227 241 - -
Stsc121051g00005 1173 PRINTS Disease resistance protein signature 154 169 - -
Stsc121051g00005 1173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 388 IPR027417 -
Stsc121051g00005 1173 SUPERFAMILY L domain-like 448 936 - -
Stsc121051g00005 1173 Gene3D - 111 281 IPR027417 -
Stsc121051g00005 1173 PANTHER DISEASE RESISTANCE PROTEIN RP 32 801 IPR044974 GO:0006952
Stsc121051g00005 1173 FunFam Probable disease resistance protein At1g63360 374 459 - -
Stsc121051g00005 1173 SUPERFAMILY L domain-like 903 1143 - -
Stsc121051g00005 1173 FunFam Probable disease resistance protein At1g61300 114 281 - -
Stsc121051g00005 1173 Pfam NB-ARC domain 131 374 IPR002182 GO:0043531
Stsc121051g00005 1173 Gene3D Ribonuclease Inhibitor 491 878 IPR032675 -
Stsc121051g00005 1173 Gene3D Ribonuclease Inhibitor 1044 1148 IPR032675 -
Stsc121051g00005 1173 Gene3D Ribonuclease Inhibitor 936 1043 IPR032675 -
Stsc121051g00005 1173 Pfam Rx N-terminal domain 2 57 IPR041118 -
Stsc121051g00005 1173 Gene3D - 1 79 - -
Stsc121051g00005 1173 Gene3D - 288 372 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121051g00005 Stsc-Chr121051 12449 16291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121051g00005 152 783 WRKY Transcription Factor Family AT5G45050 22.815 2.09e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121051g00005 - - ahf:112708719 1557.35