Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121051g00003 TTTCTAAAACTGAAATCTCTTAACTTTTATTTATTTATTTTTATAGGAAAAACCAATACGGGAAAGCCCTTGAATTGGGAAGATAGACTTCAAATGGCATTGGATGCAGCCCAAGCTGACGGTGATACGCATGTGTCGACAATTGTGGCTGGAACTCCAGGCTACCTAGATCCTGAGTACACAACATCAAATAGATTGACAGAGAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATCACAGGTCAAGCAGTGATAATAGGAACGGAAGACATGACTCATCGTATAAGTCAGCAGGTTAAAGTCCATGATTGCTGA 327 0.3853 FLKLKSLNFYLFIFIGKTNTGKPLNWEDRLQMALDAAQADGDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQAVIIGTEDMTHRISQQVKVHDC 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121051g00003 108 Pfam Protein kinase domain 42 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121051g00003 108 SUPERFAMILY Protein kinase-like (PK-like) 16 95 IPR011009 -
Stsc121051g00003 108 ProSiteProfiles Protein kinase domain profile. 1 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121051g00003 108 Gene3D Transferase(Phosphotransferase) domain 1 37 107 - -
Stsc121051g00003 108 PANTHER OS07G0107800 PROTEIN-RELATED 9 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121051g00003 Stsc-Chr121051 2530 3577 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121051g00003 21 97 Receptor kinase-like Gene Family AT1G51880 41.667 9.51e-23 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Stsc121051g00003 Pkinase 3.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121051g00003 - - ahf:112708723 133.65