Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121051g00002 TTCTATTCATGCTTTTCAATAAATACATGTCACAAGTTTCTAAAACTGAAATCTCTTAACTTTTATTTATTTATTTTTATAGGAAAAACCAATACGGGAAAGCCCTTGAATTGGGAAGATAGACTTCAAATGGCATTGGATGCAGCCCAAGGACTGGAATATCTGCATAATGGCTCTGACGGTGATACGCATGTGTCGACAATTGTGGCTGGAACTCCAGGCTACCTAGATCCTGAGTACACAACATCAAATAGATTGACAGAGAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATCACAGGTCAAGCAGTGATAATAGGAACGGAAGACATGACTCATCGTATAAGTCAGCAGGTTAAAGTCCATGATTGCTGA 387 0.3773 FYSCFSINTCHKFLKLKSLNFYLFIFIGKTNTGKPLNWEDRLQMALDAAQGLEYLHNGSDGDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQAVIIGTEDMTHRISQQVKVHDC 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121051g00002 128 ProSiteProfiles Protein kinase domain profile. 1 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121051g00002 128 PANTHER OS07G0107800 PROTEIN-RELATED 21 112 - -
Stsc121051g00002 128 Gene3D Transferase(Phosphotransferase) domain 1 22 127 - -
Stsc121051g00002 128 SUPERFAMILY Protein kinase-like (PK-like) 9 115 IPR011009 -
Stsc121051g00002 128 Pfam Protein kinase domain 67 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121051g00002 Stsc-Chr121051 2494 3577 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121051g00002 33 117 Receptor kinase-like Gene Family AT1G51880 48.333 1.72e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Stsc121051g00002 Pkinase 8.4e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121051g00002 - - ahf:112708723 154.836