Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121050g00001 ATGGAGAGCACCGACTCATCCACCGGTTCGCAACAACCGAACCTTCCACCAGGGTTTCGGTTCCACCCCACCGATGAGGAGCTCGTTGTTCACTACCTCAAGAAGAAAGCTGCATCGGCTCCTCTCCCAGTCGCCATCATCGCCGAGGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCAGCTAAGGCGACGTTTGGCGAGCAAGAGTGGTATTTCTTTAGCCCAAGGGACAGGAAATATCCGAACGGGGCTCGGCCAAACAGGGCGGCAACTTCGGGGTACTGGAAGGCGACCGGGACTGATAAGCCGGTGTTGACCTCCGGTGGGACCCAGAAGGTTGGTGTGAAGAAGGCTTTGGTCTTCTATGGAGGAAAGCCACCCAGAGGGATCAAGACTAATTGGATCATGCATGAATATAGACTTGCTGACAACAAACCTAACAATAGGCCTCCTGGTTGTGACTTGGGTAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTGTTGTGCCGAATCTACAAGAAGAACAACACACATAGGTCACCAATGGAACATGAAAGGGAAGATTCCATGGATGACATGATTGGAGGGATCCCTCCTTCCATCAACGTGTCATCCCTGAAAATTAGGTTGAGGGCTTGTGAAATGAGGTTGAAGATTGCTGTCTTTGTTGGTATGTTTGGGTGGATTTTGGTTTTTAGCTTTTGGTGGAAGACTTCATCATCAATGGCTGCTGTGATTCTGGGTTGA 753 0.4967 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKNNTHRSPMEHEREDSMDDMIGGIPPSINVSSLKIRLRACEMRLKIAVFVGMFGWILVFSFWWKTSSSMAAVILG 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121050g00001 250 MobiDBLite consensus disorder prediction 1 20 - -
Stsc121050g00001 250 MobiDBLite consensus disorder prediction 1 17 - -
Stsc121050g00001 250 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Stsc121050g00001 250 SUPERFAMILY NAC domain 7 177 IPR036093 GO:0003677|GO:0006355
Stsc121050g00001 250 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Stsc121050g00001 250 FunFam NAC transcription factor 56 24 181 - -
Stsc121050g00001 250 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Stsc121050g00001 250 PANTHER NAC TRANSCRIPTION FACTOR 56 15 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121050g00001 Stsc-Chr121050 16070 30935 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121050g00001 1 241 NAC Transcription Factor Family AT3G15510 69.636 3.90e-116 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc121050g00001 NAM 4.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121050g00001 - - vra:106763825 426.017