Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121049g00005 ATGGCGGATGCGGATAGGCCGGAGAAAGATTCTGGCGGCGGAGAAGAAACAAAGTACCGGGGAGTGAGGAAGAGGCCGTGGGGGAAGTATGGAGCCGAGATAAGGGATCCTTCCAGGCCAACCGGAAGGGTGTGGCTTGGGACGTTCGACACGGCTGAGGAAGCAGCCAGAGCTTATGATAGAGCTGCCATTGCTTTGAGGGGTGGCCTTGCCATCCTTAATTTTCCGGATGAGTATCATTCTCATCTCCCATTTATAGCTTCATCATCTTCTTATTCTAGTACTGCCATTGGATCAAGTTCTTCTTCATCCAGTGCACAACATGGGAGGGAAGTTATTGAGCTTGAGTATTTGGACAATAAGGTTTTGGAGGATCTTCTTGAAGAAGAAGAAAGGAACAAAAAGAAATACTAA 414 0.4783 MADADRPEKDSGGGEETKYRGVRKRPWGKYGAEIRDPSRPTGRVWLGTFDTAEEAARAYDRAAIALRGGLAILNFPDEYHSHLPFIASSSSYSSTAIGSSSSSSSAQHGREVIELEYLDNKVLEDLLEEEERNKKKY 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121049g00005 137 FunFam Ethylene-responsive transcription factor 2 17 78 - -
Stsc121049g00005 137 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
Stsc121049g00005 137 SUPERFAMILY DNA-binding domain 18 78 IPR016177 GO:0003677
Stsc121049g00005 137 MobiDBLite consensus disorder prediction 1 22 - -
Stsc121049g00005 137 PANTHER DNA-BINDING DOMAIN 13 130 IPR044808 GO:0003700|GO:0009873
Stsc121049g00005 137 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
Stsc121049g00005 137 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
Stsc121049g00005 137 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Stsc121049g00005 137 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Stsc121049g00005 137 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Stsc121049g00005 137 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121049g00005 Stsc-Chr121049 46004 46417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121049g00005 15 134 AP2-EREBP Transcription Factor Family AT3G23230 58.065 3.14e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Stsc121049g00005 AP2 2.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121049g00005 - - adu:107483754 221.476