Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121047g00004 ATGATGGCTACTTGTATGTCTACTAGTTTTGCACCTTGTAAGACTAGGAATTCAGCAATGGTGGTTAATGTAGTTGGGGGGAAAACATTGACAAAGAATTACCTTAGTAGGGTTTATTTCATGAGAATGTATAACAAGAAGTATGGATTTTCGGGTGGCACTCGAAACTCGGGTCTAGTTCAAGTTAAGTGTTCAGCAAATTCCCATAGTGTTAGTCCATATCATAGTCAAGACCCTTTTCTAAATTTACATCCTGAGGTGTCAATGTTAAGAGGAGAAGGGAGCAACCCCAGAAGGGATGACGGTTCGGGTAGAGATGTATCCGAGAGTTTAGGAGTTACTCCTAATCCTAGTAATTACAGTGAAGCAAAGATCAAGGTTATTGGTGTTGGAGGTGGTGGATCAAATGCAGTCAATAGGATGATAGAGAGTTCAATGGGCGGCGTGGAGTTCTGGATTGTTAATACTGATATTCAAGCCATGAGAATGTCGCCTGTTTTGCCTGAAAACCGTTTGCAAATCGGTTTGGAGCTTACACGAGGTCTTGGCGCTGGTGGTAACCCTGAAATGGGCATGAATGCTGCGAAAGAAAGCAAAGAATCAATCGAAGAAGCACTTTATGGAGCTGACATGGTCTTTGTTACAGCTGGAATGGGTGGGGGAACCGGCACAGGTGGAGCTCCGGTTATTGCTAGTATTGCGAAGTCAATGGGTATACTGACTGTTGGTATTGTCACCACCCCTTTCTCATTTGAAGGACGAAAGCGAGCTATTCAAGCACAAGAAGGAGTTACAGCCTTGAGAGACAATGTTGACACTCTTATAGTTATTCCGAATGACAAGCTACTAACAGCGGTTTCTGAGTCCACCCCTGTAACCGAAGCATTCAATCTAGCCGATGACATTCTTCGACAGGGCGTTCGTGGCATATCTGATATTATAATGATTCCTGGGATGGTAAATGTTGATTTTGCTGATGTTCGAGCAATAATGGCGAATGCAGGTTCTTCACTTATGGGGATAGGAACTGCAACTGGGAAATCCAGGGCAAGGGATGCCGCATTAAACGCTATCCAATCACCTTTGCTAGATATCGGTATAGAGAGGGCTACTGGAATTGTATGGAACATAACTGGTGGAACCGATCTTACTTTATTTGAGGTAAATGCTGCAGCAGAGGTTATATATGATCTTGTCGACCCTACAGCGAATTTAATATTTGGAGCAGTTATCGATCCATCACTCAGTGGTCAAGTGAGCATAACACTAATTGCAACCGGATTCAAGCGTCAAGAGGAAGGCGAGGGCAGGCCTCCACAGGCTAGTCAACTTGCACAGGGAGATACAACCGTTGGTATCAATCGGCGATCTCCCTCATTCACCGATGGCAGTTTTGTTGAGATCCCTGAATTCCTAAAGAAGAAAGGCCAGACACGCTATCCGAGGGCTTAA 1452 0.4435 MMATCMSTSFAPCKTRNSAMVVNVVGGKTLTKNYLSRVYFMRMYNKKYGFSGGTRNSGLVQVKCSANSHSVSPYHSQDPFLNLHPEVSMLRGEGSNPRRDDGSGRDVSESLGVTPNPSNYSEAKIKVIGVGGGGSNAVNRMIESSMGGVEFWIVNTDIQAMRMSPVLPENRLQIGLELTRGLGAGGNPEMGMNAAKESKESIEEALYGADMVFVTAGMGGGTGTGGAPVIASIAKSMGILTVGIVTTPFSFEGRKRAIQAQEGVTALRDNVDTLIVIPNDKLLTAVSESTPVTEAFNLADDILRQGVRGISDIIMIPGMVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGTDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEEGEGRPPQASQLAQGDTTVGINRRSPSFTDGSFVEIPEFLKKKGQTRYPRA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121047g00004 483 MobiDBLite consensus disorder prediction 431 462 - -
Stsc121047g00004 483 PRINTS Cell division protein FtsZ signature 239 260 IPR003008 GO:0005525
Stsc121047g00004 483 PRINTS Cell division protein FtsZ signature 325 346 IPR003008 GO:0005525
Stsc121047g00004 483 PRINTS Cell division protein FtsZ signature 302 324 IPR003008 GO:0005525
Stsc121047g00004 483 PRINTS Cell division protein FtsZ signature 211 231 IPR003008 GO:0005525
Stsc121047g00004 483 Pfam Tubulin/FtsZ family, GTPase domain 124 285 IPR003008 GO:0005525
Stsc121047g00004 483 FunFam Cell division protein ftsZ, putative 334 442 - -
Stsc121047g00004 483 Gene3D Tubulin/FtsZ, GTPase domain 115 333 IPR036525 -
Stsc121047g00004 483 Gene3D - 334 441 IPR037103 -
Stsc121047g00004 483 SUPERFAMILY Tubulin C-terminal domain-like 317 431 IPR008280 -
Stsc121047g00004 483 SUPERFAMILY Tubulin nucleotide-binding domain-like 123 321 IPR036525 -
Stsc121047g00004 483 NCBIfam cell division protein FtsZ 120 438 IPR000158 GO:0003924|GO:0005525
Stsc121047g00004 483 Pfam FtsZ family, C-terminal domain 335 429 IPR024757 -
Stsc121047g00004 483 FunFam Cell division protein FtsZ 116 333 - -
Stsc121047g00004 483 Hamap Cell division protein FtsZ [ftsZ]. 120 436 IPR000158 GO:0003924|GO:0005525
Stsc121047g00004 483 SMART Tubulin_C_4 320 437 IPR018316 -
Stsc121047g00004 483 SMART Tubulin_4 124 318 IPR003008 GO:0005525
Stsc121047g00004 483 ProSitePatterns FtsZ protein signature 2. 210 231 IPR020805 GO:0005525
Stsc121047g00004 483 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 102 437 IPR045061 GO:0003924|GO:0005525
Stsc121047g00004 483 CDD FtsZ_type1 135 427 IPR000158 GO:0003924|GO:0005525
Stsc121047g00004 483 MobiDBLite consensus disorder prediction 89 116 - -
Stsc121047g00004 483 MobiDBLite consensus disorder prediction 442 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121047g00004 Stsc-Chr121047 16012 18744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121047g00004 214 422 PP2C-type Phosphatase Gene Family AT1G75010 23.744 5.07e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121047g00004 K03531 - gmx:100784356 763.837