Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121045g00011 ATGGCCACGTTTTCCATTGGGGCACACACGCACTTGTCTATGTTCCACCATTTCAGGAACTCCAGGCTTTCACTTCATCGCCTTCACTCTCTTGAATCTTCACCCTCCTCGCTCTGTAGGATCAAAGGGCCCAGCTTGCAACGTAATCATGTCTTGGCGCGTGCAGAAGATAAGGCTAGAGGTTCCTCCACTTCTACCCAGCAGGAGTTCCAGGAGTTACCAACGGAATCTGGAACTTGTGATCCTCTGTGTTCACTTGATGAAACAAGCTCACAAGATTTTGAGGACAGTTACAAGCCCAAGACCGATTTGCTCAAAGCTGTTGCTGTATTTGCAGCAGCTGCAACTGGGGCAGTGGCAATTAACCATTCTTGGGTGGCAGCAAATCAGGATCTTGCCATGGCATTGCTATTTGTAATAGGATATGTAGGCATCATATTTGAGGAATCTCTGGCCTTCAACAAAAGTGGAGTAGGACTATTGATGGCTGTAAGCTTGTGGACTATTAGAAGTATTGGGGCTCCATCAACTGGTGTAGCTGTTTCTGAGTTAACGCATGCATCCGCGGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGAGCTATGACTATTGTGGAAATAGTCGATGCTCATCAAGGGTTTAAGCTAGTTACTGACAATATAACAACCCGAAAGCCACGACTTCTCCTCTGGGTGATTGGAATTGTGGCATTTTTTCTCAGTTCAGTTCTAGACAACCTTACCTCTACAATAGTCATGGTTTCTCTGTTACGGAAATTAGTACCCCCATCAGAGTATCGAAAGATTCTTGGAGCCGTTGTCGTAATAGCTGCAAATGCTGGTGGTGCATGGACTCCTATTGGTGATGTTACCACCACTATGCTGTGGATACATGGTCAAATATCTACAGTGCAAACAATGACGGGTTTGTTTGTGCCTTCAGCCATTTCTCTAGCTGTTCCATTGGCGCTCATGTCCCTGACCAGCGAAGTGAATGGGAGGGGACAGGATTCTCCAAATGTCTTGGCTTCCGAACAGATGGCTCCTCGAGGACAGCTTGTTTTCTCGGTGGGTATAGGAGCTTTGATTTTCGTCCCAGTGTTCAAGGCCCTCACAGGTTTGCCTCCGTACATGGGGATGCTACTTGGACTTGGTGTGCTTTGGATCCTCACTGATGCTATTCATTATGGTGAATCTGAAAGACAAAGGCTAAAAGTGCCACAAGCTCTGTCAAGAATAGACACTCAAGGAGCTCTATTCTTCCTGGGAATTCTATTGTCTGTTAGCAGCCTGGAGGCAGCAGGAATCCTTCGCGAAATAGCAAATTACCTTGATACTCATATCCAGAGCAGTGAACTGATTGCAAGTGCCATTGGGGTCATATCGGCAATAATTGACAATGTTCCATTGGTTGCTGCTGCAATGGGAATGTATGATCTCTCATCTTTTCCCCAGGATTCTGAGTTCTGGCAACTGATTGCATTCTGTGCCGGTACTGGTGGGTCGATGTTAGTTATTGGCTCAGCTGCCGGAGTTGCATTCATGGGGATGGAGAAGGTGGACTTCTTTTGGTACTTTCGAAAGGTTAGTGGCTTTGCTTTTGCGGGTTATGCTGCTGGTATTGCTGCTTATTTAGCATTACATAACCTCAACATATCCCTGCCCACAACTCTAGCAGAGGTTCCTTTCCTTTCTGGTTCATAA 1704 0.4607 MATFSIGAHTHLSMFHHFRNSRLSLHRLHSLESSPSSLCRIKGPSLQRNHVLARAEDKARGSSTSTQQEFQELPTESGTCDPLCSLDETSSQDFEDSYKPKTDLLKAVAVFAAAATGAVAINHSWVAANQDLAMALLFVIGYVGIIFEESLAFNKSGVGLLMAVSLWTIRSIGAPSTGVAVSELTHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRLLLWVIGIVAFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTVQTMTGLFVPSAISLAVPLALMSLTSEVNGRGQDSPNVLASEQMAPRGQLVFSVGIGALIFVPVFKALTGLPPYMGMLLGLGVLWILTDAIHYGESERQRLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYLDTHIQSSELIASAIGVISAIIDNVPLVAAAMGMYDLSSFPQDSEFWQLIAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYFRKVSGFAFAGYAAGIAAYLALHNLNISLPTTLAEVPFLSGS 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121045g00011 567 MobiDBLite consensus disorder prediction 59 75 - -
Stsc121045g00011 567 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 50 567 IPR045016 GO:0006814|GO:0015297
Stsc121045g00011 567 MobiDBLite consensus disorder prediction 54 82 - -
Stsc121045g00011 567 Pfam Citrate transporter 142 498 IPR004680 GO:0016020|GO:0055085
Stsc121045g00011 567 NCBIfam sodium:proton antiporter NhaD 159 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121045g00011 Stsc-Chr121045 51782 57835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121045g00011 1 567 Antiporters AT3G19490 76.736 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121045g00011 - - gmx:100779521 869.766