Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121045g00005 ATGAGACTTACCTCTAGCATTCTCCATTTGTGGTGGAGTCTCTCATCCTTTGTTGTTCTTCTTTTTCTTGCTCTGCTTCAATCATCAGCAGTACTTGCTCTTAACTCTGATGGGATTCTCTTGCTTCACTTCAAGTACTCTATCCTCAGTGACCCTTTATCAGTCTTAGATACATGGAACTACGATGATGTAACTCCATGTTCATGGAATGGAGTCACATGTACAGAAATTGGAACACCAGATACCCCAGATTTTCTGAGAGTCACAAGCTTGAACCTTCCCCATAGCCAGCTTCTTGGTTCCATTGCTGAAGAACTAGGCATGATTGAACACCTTCGCCACCTTGATCTCTCCCACAACCTCCTCAATGGTTCACTGCCAAATTCCATCTTCAACTCTTCACAGCTTCAAGTTCTTTCCCTCTCAAACAATGTCATCTCAGGAGAGTTACCAGAGCTCATTGGCAAATTAGCAAGCCTTCAAGTTCTCAATCTCTCTGACAATGCCTTTGGTGGTTCAATCCCAGAAACCCTCACCTCTTTGCAGAACCTAACAACCGTTTCACTCAAGAGTAACTACTTCTCAGGAGAGGTCCCAAGCGGTTTCAACTTCACCGAGGTTTTGGATCTGTCATCAAATCTTCTCAACGGTTCTCTGCCAAATGAGTTTGGTGGTGAAAACTTGAGGTACTTGAACCTCTCTTACAACAAGGTTTCAGGGACAATTCCACAAACATTTGCAAGGCATATTCCTGGAAACGCCACAATTGATCTCTCCTTCAACAACCTCACAGGTCCAATACCTGATTCTTCAGCTTTACTCAACCAGAAAGCCGAATCTCTATCTGGAAATGGTGATCTATGCGGGAAGCCTCTCAAGATTCTGTGTTCCATTCCTTCTACACTCTCTGATCCTCCAACCAATGCAACCACATCTTCACCTGCAATTGCAGCCATACCAAAAACAATTGACACAACGCCACCAACAAACGCAACGGGAGGAAGCAACAACGGGTCTCAGAACGTGTCACCGAGTGGCCTAAAACCTGCAACCATAGCCGCCATTGTTGTTGGAGACTTGGCCGGCATGGCTGTTCTAGCATTGATCATTCTCTTCGTCTACCAAAAGAGAAAGAATAAAAGGGATCCAAATCAAACCAAGAACAACAGCGAAAACAAGAAAGACGAAATCATCACAAAACAAAACCATAACCACGACGCGAAAACATCATCATCATCACTCCCATGCTCATCATTATGCCTAACAATGAAAGAAGAATCGACCTCATCAGAAGAATCGTCATCAGCAAGCTCCGAGAGCGAGCAGGAGAACGCAGAAAGCGGTAAGGTTGCGAAAGGAGGGAGTCTTGTGACGGTGGACGGAGAGACAAAGCTGGATTTGGAGAGCCTCCTGAAGGCATCGGCGTATATATTGGGAAGCAGTGGGGGAAGCATAGTGTACAAGGCAGTTCTAGAAGATGGTAGAATCTTCGCCGTACGGAGAATCGGTGAGTGTGGAATTGAGAGGATGAAGGACTTCGAGAATCAAGTCAGAGCCATTGCCAAGATTCGTCATCCCAATCTGGTTAGGGTTCGCGCCTTCAGCTGGGCTCAAGACGAGAAGCTTCTAATCTCCGATTACGTTTCTAATACCACCCTCGCTACCATCGGTCCAAGGAGAGGTAGTGGTTCATCATCACCCTTTAACTTGGGGTTGGAAATTCGGTTAAAGATAGCAAAAGGGGTTGCACGAGGCTTGGCATTCATTCACGAGAAGAAACACGTGCATGGCAATATTAAACCCAGCAACATTTTGTTAAATTCCGAGATGGAACCCGTTATCTCTGATTTCGGGCTAGACCGGCTTATCTTAAACAACGATAACATTAACCACAGAGCAAACGGTTCGGCTAGGAACTTGATGCAACAGCAACAAGAGAGTGCAACCATTGGTTCAAGCCCCTATTCTGCTACAACGACAACAATGCTTGGAACATCATCATCCATTAGTGGGACCCCAATGGCGTATCAAGCACCAGAGTCGCTTCAAAACATTAGGCCAAACCCCAAGTGGGACGTGTACTCGTTTGGGATGGTTCTGCTTGAGCTTCTAAGTGGGAGGGTTATCACGGATCGAGAGTTGGAGCAGTGGTTTGGAGTTGGACCGGGTTCGGTGGAAGAGGAGAAGAATCGGGTGTTGATGAGGATGGCCGACCTGGCAATCAAGTCTGACGTGGCTGGAAGAGAGATTGCCATATTGACTTGCTTCAAGTTGGGGCTGAGTTGTACCTCAGTTGCCCCACATAAGAGACCCTCAATGAAAGAGGCTCTGCATATCTTGGACAAGATACCTTCATCTGCCACAAATTAA 2370 0.4616 MRLTSSILHLWWSLSSFVVLLFLALLQSSAVLALNSDGILLLHFKYSILSDPLSVLDTWNYDDVTPCSWNGVTCTEIGTPDTPDFLRVTSLNLPHSQLLGSIAEELGMIEHLRHLDLSHNLLNGSLPNSIFNSSQLQVLSLSNNVISGELPELIGKLASLQVLNLSDNAFGGSIPETLTSLQNLTTVSLKSNYFSGEVPSGFNFTEVLDLSSNLLNGSLPNEFGGENLRYLNLSYNKVSGTIPQTFARHIPGNATIDLSFNNLTGPIPDSSALLNQKAESLSGNGDLCGKPLKILCSIPSTLSDPPTNATTSSPAIAAIPKTIDTTPPTNATGGSNNGSQNVSPSGLKPATIAAIVVGDLAGMAVLALIILFVYQKRKNKRDPNQTKNNSENKKDEIITKQNHNHDAKTSSSSLPCSSLCLTMKEESTSSEESSSASSESEQENAESGKVAKGGSLVTVDGETKLDLESLLKASAYILGSSGGSIVYKAVLEDGRIFAVRRIGECGIERMKDFENQVRAIAKIRHPNLVRVRAFSWAQDEKLLISDYVSNTTLATIGPRRGSGSSSPFNLGLEIRLKIAKGVARGLAFIHEKKHVHGNIKPSNILLNSEMEPVISDFGLDRLILNNDNINHRANGSARNLMQQQQESATIGSSPYSATTTTMLGTSSSISGTPMAYQAPESLQNIRPNPKWDVYSFGMVLLELLSGRVITDRELEQWFGVGPGSVEEEKNRVLMRMADLAIKSDVAGREIAILTCFKLGLSCTSVAPHKRPSMKEALHILDKIPSSATN 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121045g00005 789 Gene3D Ribonuclease Inhibitor 34 204 IPR032675 -
Stsc121045g00005 789 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 88 782 - -
Stsc121045g00005 789 MobiDBLite consensus disorder prediction 303 344 - -
Stsc121045g00005 789 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 34 204 - -
Stsc121045g00005 789 Pfam Leucine Rich Repeat 227 246 IPR001611 GO:0005515
Stsc121045g00005 789 Pfam Leucine Rich Repeat 111 130 IPR001611 GO:0005515
Stsc121045g00005 789 SUPERFAMILY Protein kinase-like (PK-like) 477 780 IPR011009 -
Stsc121045g00005 789 Gene3D Ribonuclease Inhibitor 205 298 IPR032675 -
Stsc121045g00005 789 CDD TM_EGFR-like 351 381 - -
Stsc121045g00005 789 FunFam Leucine-rich repeat receptor-like protein kinase 205 298 - -
Stsc121045g00005 789 ProSiteProfiles Protein kinase domain profile. 472 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121045g00005 789 MobiDBLite consensus disorder prediction 404 444 - -
Stsc121045g00005 789 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Stsc121045g00005 789 Gene3D Phosphorylase Kinase; domain 1 437 547 - -
Stsc121045g00005 789 Pfam Protein kinase domain 478 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121045g00005 789 MobiDBLite consensus disorder prediction 379 453 - -
Stsc121045g00005 789 Gene3D Transferase(Phosphotransferase) domain 1 560 789 - -
Stsc121045g00005 789 ProSiteProfiles Leucine-rich repeat profile. 111 133 IPR001611 GO:0005515
Stsc121045g00005 789 MobiDBLite consensus disorder prediction 379 403 - -
Stsc121045g00005 789 SUPERFAMILY L domain-like 38 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121045g00005 Stsc-Chr121045 19476 22514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121045g00005 14 783 Receptor kinase-like Gene Family AT4G37250 48.652 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc121045g00005 Pkinase 1.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121045g00005 - - aip:107618064 1302.73