Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121039g00005 ATGGCTTCTTCTTGGAGTCCAAATCACGAGAAGATGCAGAAGAACTTGAGCATACAGTTAGCTGTGGCAGTAAGAAGTGTTCAATGGAGTTATGGAATATTCTGGGCACCTTCAACAACCCAAGAAGGAGTGCTGGAATGGAGGGAAGGCTACTACAATGGAGACATTAAGACAAGGAAGACAGTGCAGACAACAATGGAAATTACGAATGACAAAATTGGGGTTCAGAGGAGTGAGCAACTGAAGGAACTGTACAAGTTCCTTCTTGTTCGTGAATCTGATCCACAAACAAAAAGGCCTTCAGCTGCATTGTCTCCTGAGGATCTTTCAGATTCTGAGTGGTATTATTTGGTTTGCATGTCCTTTGTGTTCTACCCTAATCAAAGTTTGCCTGGTAGAGCACTAGAAATTGGTGAAACAATATGGTTATGCAATGCTCAACATGCAGATAGTAAAGTTTTCTCTCGTTCTTTACTTGCAAAGAGTGCATCAATTCAGACTGTGGTGTGCTTCCCCTATCTAGGGGGTGTTATTGAGATTGGTACAACTGAACTGGTGCCAGAGGACCCTAATCTTATTCAACATGTGAAGGCTTGTCTCTTGGAATTCTCAAAGCCTATTTGCTCTGATAAATCTTCATCAGCACTCAATAAACCTGATGATGACAAACTTCAAGCATGCTCCAATGGTGAACATGTTTTAGTGGACACAAAGGTTTTGGAGTACTCATGTTCACCAGCTGAAGAAATCAAGGTTGATCAAGATCCTATCAAGGAACTACAAGAAGATTCCAACATGGATTCTCCTGATGGATGTTCCAATGGTTTCAAGCACAATTTCTATGTCGGGGAATCGATGGTTGAGGGAATCCATGATGGAGGGCCTTCTTCTCCAGTTCATTTCATGGATGATGATGATGCCTTGGGCAATGGTGCACCTGATTCCCTGAGTTCTTGTGATTGTATATCCGAGGCGTCTGAGAACCGAGGCAAGGCTTCAAAGGATGTTCAACTAATAAGGGGAATTCGAAGCTTCAATCATTTGAATAGAAGTTCAATGGATGCAACAGCAACTGATGAACACTTGAGCTACACAAGAATACTCTGTGCTATTCTTGGAAACTCGTCGACATTCAAGCAGAATCCGCATGCTAGTAACTCAAATTGCAAATCGAGTTTTGTGAAATGGAAGAAAGGAGGAATCTGTGGGCAGAATCGGCAGCGGTTGGACCAAAGCCTGTTGAAGAAGACTCTGTTTACTGTCCCTCTTATGCATAGGAGTTCCTCATCTATCAAATCAATGAAAGAAAATGAGACAAAAGAATGGACTAACAGATTGGAAAATGCTGATGACAAGTTCATGGAAAATGTCTTATCTGATCAAATAAGAGAAACTGGAAACTTTAAGGATCTCAAGTCTTCAATTCCTCATCCTATAAGTGAGGTTGAGAAGATTTCGATCCTAGGCGACACGATTAAGTACTTGAAGGAGCTTGAGACAAGAGTGGAAGAACTAGAATCTTACATGGACATGGCAGATTCAGAAGCAAGAACGAAAAGAAAATGTCCAGATGTGATAGAGCAGATATCAGATAACTATGGGGCCAGAAAGGTTTACAGTAAGGGAATGAAAAAGCCTTGGATGATGAACAAGAGAAAGGCTTGTGACATTAATGAAACAGACATAGAAGAAACAGACAGATTTGTTGTTTCTGAAGAAGATAATAACAAGCCATTGGATGTGAAGATTAAGATGAAGGAGCAACAGGTTTTGATTGAGATGAAATGTGCTTACAGAGAATATATATTGCATGATATCATGGATGCTATTAACAATCTGCATTTGGATGCTCACACAGTTGAGTCATCAACAACTGAAGGTCTTCTTACATTAACACTTAAATCCAAGTTTCGAGGGACGGCGACTGCCCCGCCAGGGATGATCAAAGAAGCACTCTGGAAGGTGTGTGGAAATATTTGA 1980 0.4096 MASSWSPNHEKMQKNLSIQLAVAVRSVQWSYGIFWAPSTTQEGVLEWREGYYNGDIKTRKTVQTTMEITNDKIGVQRSEQLKELYKFLLVRESDPQTKRPSAALSPEDLSDSEWYYLVCMSFVFYPNQSLPGRALEIGETIWLCNAQHADSKVFSRSLLAKSASIQTVVCFPYLGGVIEIGTTELVPEDPNLIQHVKACLLEFSKPICSDKSSSALNKPDDDKLQACSNGEHVLVDTKVLEYSCSPAEEIKVDQDPIKELQEDSNMDSPDGCSNGFKHNFYVGESMVEGIHDGGPSSPVHFMDDDDALGNGAPDSLSSCDCISEASENRGKASKDVQLIRGIRSFNHLNRSSMDATATDEHLSYTRILCAILGNSSTFKQNPHASNSNCKSSFVKWKKGGICGQNRQRLDQSLLKKTLFTVPLMHRSSSSIKSMKENETKEWTNRLENADDKFMENVLSDQIRETGNFKDLKSSIPHPISEVEKISILGDTIKYLKELETRVEELESYMDMADSEARTKRKCPDVIEQISDNYGARKVYSKGMKKPWMMNKRKACDINETDIEETDRFVVSEEDNNKPLDVKIKMKEQQVLIEMKCAYREYILHDIMDAINNLHLDAHTVESSTTEGLLTLTLKSKFRGTATAPPGMIKEALWKVCGNI 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121039g00005 659 Coils Coil 432 452 - -
Stsc121039g00005 659 Gene3D - 460 530 IPR036638 GO:0046983
Stsc121039g00005 659 Coils Coil 495 515 - -
Stsc121039g00005 659 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 199 IPR025610 -
Stsc121039g00005 659 PANTHER TRANSCRIPTION FACTOR TT8 11 656 - -
Stsc121039g00005 659 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 467 513 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121039g00005 Stsc-Chr121039 27959 31840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121039g00005 15 656 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 39.909 1.83e-127 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121039g00005 - - adu:107472380 1212.98