Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121036g00010 ATGGCATTTTACAAGTGTTGGTTGATTTTGACAATAACATTATGTGTTATTGGGATTGGTTATTCAGGTCATGGTCATGGTCATGGTCATGATGATGATCAGTTATTAAGTCAAAACTTTTATCAAAAAACATGTCCTAGAGCCGTTGAAACCATAAGGAAGGCAGTGGTTGAAGCTGTTTTTCAAGAGCCTCGCATGGGTGCTTCCTTGCTTCGCCTCCATTTCCATGACTGTTTTGTCCAAGGATGTGATGCATCGGTGTTGCTAGATGACACCGCAAACTTCATAGGTGAGAAGAATTCACTTCCCAACAAGGATTCACTGAGGGGTTTTGAGGTCATTGACAGCATCAAATCCCAATTGGAATCCATGTGCCCTTCCGTTGTTTCTTGTGCTGATATCTTAGCTCTTGCTGCCAGAGATGCTGTTTTTGCTCTTAAAGGACCAAGATGGGAGGTTCAATTGGGCAGAAGAGACTCAACCACAGCAAGTTTAAGTGAGTCTAATTCAGACTTACCTGCACCCTTCTTCAATCTCAGTGCCCTCATCACTGCTTTCCAGAAGAAAAATTTCAACATCCAAGAAATGGTTACTTTATCAGGAGGTCACACAATAGGGAGTGCGAGGTGCACATTTTTCAGAGACAGGATTTACAATGAGAGCAACATAGATCCAAGCTTTGCAGAAGCAATGAGAGCATTGTGTCCCTCTGGAGATGGTGATGGAGATGACAACCTTGCTCCCTTTGATTCCACCACTCCAGACACTTTTGACAATGCCTTCTACCAGAACCTGGTGAATCAGAGGGGTCTTGTGCACTCTGATCAGCAGCTATATGCTAATGGAGCAGGCATCACTGACTCTCAGGTGATTATGTATAGCAGAAACTTTGGTCGTTTCAAGAAGGATTTTGGAGATGCAATGGTCAAGATGAGCTTGCTTTCTCCTCTCACTGGCAATGATGGTCAAATCAGGACTAACTGCAGATTTGTTAATAATTAA 1002 0.4291 MAFYKCWLILTITLCVIGIGYSGHGHGHGHDDDQLLSQNFYQKTCPRAVETIRKAVVEAVFQEPRMGASLLRLHFHDCFVQGCDASVLLDDTANFIGEKNSLPNKDSLRGFEVIDSIKSQLESMCPSVVSCADILALAARDAVFALKGPRWEVQLGRRDSTTASLSESNSDLPAPFFNLSALITAFQKKNFNIQEMVTLSGGHTIGSARCTFFRDRIYNESNIDPSFAEAMRALCPSGDGDGDDNLAPFDSTTPDTFDNAFYQNLVNQRGLVHSDQQLYANGAGITDSQVIMYSRNFGRFKKDFGDAMVKMSLLSPLTGNDGQIRTNCRFVNN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121036g00010 333 Gene3D - 39 329 - -
Stsc121036g00010 333 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 FunFam Peroxidase 173 311 - -
Stsc121036g00010 333 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Stsc121036g00010 333 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 FunFam Peroxidase 39 176 - -
Stsc121036g00010 333 SUPERFAMILY Heme-dependent peroxidases 36 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 CDD secretory_peroxidase 36 331 IPR033905 GO:0004601|GO:0042744
Stsc121036g00010 333 ProSiteProfiles Plant heme peroxidase family profile. 35 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 PANTHER PEROXIDASE 72-RELATED 34 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 Pfam Peroxidase 53 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121036g00010 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Stsc121036g00010 333 Gene3D Peroxidase, domain 2 173 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121036g00010 Stsc-Chr121036 52726 54366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121036g00010 36 332 Peroxidase AT5G05340 56.229 2.74e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121036g00010 K00430 - gmx:100802244 440.269