Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121032g00006 ATGGAAAGGGATGTGTGTGATCTTTCTCCTACATGGGATTGTGAAAATGGCAATAATAGTGTGGAGAAAAGGCTTAGGCTATTTGGGTTTGAGTTGAATCCATCCTCAAACAATAATGTCAAAGATCCTAACAACACTACAGAAGGATCAGATGAAAGTGTGAATTCATCATCTAACTCAGTTTCTTCAGAAGGAGGAGACAAGACCACAGCACAAGATCATCAAAGAAGCACATCAATAGCCACAACAAATAATAATGAGAAGAAGTTTGAGTGCCAATACTGTTTGAAGGAATTTGCAAATTCACAAGCACTTGGTGGGCACCAAAATGCTCACAAGAAAGAAAGGATGAAGAAGAAGAGGTTGCAGCTTCAAGCAAGGAAAGCCACCATAAATTACTATCTTCAACAACCTAATTTTCCAAATAGTAGCCACAATCATCATCATCATCATGGTTTCTCTTACCATAATAATAATCATAATCATGGGTCATCTTGGTTCTATGATCCCTCTTCCTATAACTACTATTCTGAGTTCACACTCTGTGAAGAACCCCAAATTAGCTTCAACCCCAATGATCAAGATTCAAACTTTTTGGTTGAGAAATCATCAAATACTAATTGGTATTCATCTCTACCATCATCACATCAAGCTGCTCCTTCTTCAATGCAAGATTCTTGCATGTTCAATTTCTCAAAGCCTTGCAACTTCCCTGATTCTTCTTCAAATAATCATCAAATTCAAAGTAATAACAAAGCTTTGGATCTTCAATTAGGCCTCAATTTGCAGTCAAATACAAGAAGGGCCTAA 810 0.3704 MERDVCDLSPTWDCENGNNSVEKRLRLFGFELNPSSNNNVKDPNNTTEGSDESVNSSSNSVSSEGGDKTTAQDHQRSTSIATTNNNEKKFECQYCLKEFANSQALGGHQNAHKKERMKKKRLQLQARKATINYYLQQPNFPNSSHNHHHHHGFSYHNNNHNHGSSWFYDPSSYNYYSEFTLCEEPQISFNPNDQDSNFLVEKSSNTNWYSSLPSSHQAAPSSMQDSCMFNFSKPCNFPDSSSNNHQIQSNNKALDLQLGLNLQSNTRRA 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121032g00006 269 MobiDBLite consensus disorder prediction 32 82 - -
Stsc121032g00006 269 SUPERFAMILY beta-beta-alpha zinc fingers 86 117 IPR036236 -
Stsc121032g00006 269 PANTHER ZINC FINGER PROTEIN 5 19 263 IPR044299 GO:0010090
Stsc121032g00006 269 Pfam C2H2-type zinc finger 90 115 - -
Stsc121032g00006 269 Gene3D Classic Zinc Finger 66 151 - -
Stsc121032g00006 269 ProSitePatterns Zinc finger C2H2 type domain signature. 92 112 IPR013087 -
Stsc121032g00006 269 ProSiteProfiles Zinc finger C2H2 type domain profile. 90 117 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121032g00006 Stsc-Chr121032 34886 36053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121032g00006 24 133 C2H2 Transcription Factor Family AT1G68360 42.609 3.20e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121032g00006 - - adu:107488933 398.667