Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121030g00007 ATGGTGGTGAGGGTATATGGTCCAAAAACAGCAGCCTGCCCTCAAAGGGTCTTAGCTTGCCTCTTAGAGAAAGAGGTTGACTTTGAAATTGTTCCTGTTGACCTTGATCATGGAGAGCAAAAGCAACCACAATTCCTTCTAAAACAGCCTTTTGGTCAAGTCCCGGTTGTGGAAGACGGGGATTTCAGACTCTTTGAGTCAAGGGCAATAGTAAGGTACTACGCAGCAAAACATGCAGATCGTGGTCCTAATCTATTGGGTACAACCTTCGAGGAGAGAGCAATGGTGGACCAGTGGCTTGAAGTAGAAGCACACAACTTCAATGATTTGTGTTTCACTCTAATGCTTCAACTTGTGATCCTACCAAAGATAGGTCAGCCAGGAGACTTGGCTTTGGCTCATACCTCTGAGCAGAAGCTACACAAGGTGCTTGATGTGTATGACAAGAGGCTCTCCCAGAGCACTTATCTCGCCGGAGACACCTTCACTTTGGCCGATCTTAGCCACCTTCCGGGCATCGATCATCTCATTGAGGATGCTAAGATGGGGCACTTGATCACTGAGAGGAGCAATGTGAATGCTTGGTGGCAGAAAATATCAGGCAGGCCAGCTTGGAAAAAATTGAAGGAATTGGTTCAGTAA 642 0.4673 MVVRVYGPKTAACPQRVLACLLEKEVDFEIVPVDLDHGEQKQPQFLLKQPFGQVPVVEDGDFRLFESRAIVRYYAAKHADRGPNLLGTTFEERAMVDQWLEVEAHNFNDLCFTLMLQLVILPKIGQPGDLALAHTSEQKLHKVLDVYDKRLSQSTYLAGDTFTLADLSHLPGIDHLIEDAKMGHLITERSNVNAWWQKISGRPAWKKLKELVQ 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121030g00007 213 SUPERFAMILY Thioredoxin-like 3 82 IPR036249 -
Stsc121030g00007 213 SFLD Main (cytGST) 4 202 - -
Stsc121030g00007 213 FunFam Glutathione S-transferase F2 2 86 - -
Stsc121030g00007 213 SUPERFAMILY GST C-terminal domain-like 81 208 IPR036282 -
Stsc121030g00007 213 Pfam Glutathione S-transferase, N-terminal domain 2 73 IPR004045 -
Stsc121030g00007 213 Gene3D - 87 208 - -
Stsc121030g00007 213 FunFam Glutathione S-transferase F2 87 209 - -
Stsc121030g00007 213 CDD GST_N_Phi 2 77 - -
Stsc121030g00007 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Stsc121030g00007 213 CDD GST_C_Phi 91 209 IPR034347 -
Stsc121030g00007 213 Gene3D Glutaredoxin 1 86 - -
Stsc121030g00007 213 SFLD Glutathione Transferase (cytosolic) 4 202 IPR040079 -
Stsc121030g00007 213 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 210 - -
Stsc121030g00007 213 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 213 IPR010987 -
Stsc121030g00007 213 Pfam Glutathione S-transferase, C-terminal domain 115 203 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121030g00007 Stsc-Chr121030 44723 45982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121030g00007 1 211 Glutathione S-transferase Gene Family AT3G03190 56.872 1.07e-88 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121030g00007 K00799 - gmx:100796010 354.755