Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121029g00008 ATGGAAACAGTAGTTGCAATTGAGGATAATGATGATGGGAAGCTTGAAGACATTGGAGTTGATAGAAGTAGCTTTGCCTTGTCTTCTCCAAAGCAGATTGCCAACCCAGTTGTGTACAAGCTCGTCCGGGTTGAAGGTGATGGGAGGTTAGTGCCTGCAACAGATGATGAAGTAATGGAGATGGAGGATTTTCTTGAGCATGAAAACAGTGAAATGCGTGTTGTTGCGGACACTGGGCAAAGTTTGGAGTGCATATCAATTGAAAGATCATCTTCTGGGAAACTTCGATTGGAGTGTCCAAAAGGCACTGCCGATGCAGATTTTGGGAAACTAAATGCAAAATTACAGATGTTGCAAAAGGTCAAACAAGAAGAGAGACTTCGATTGTCTTGTGAATCACCTGTTCGTTCTTGTGCAAAGAAGGAAAGCCAGTGTTCTGTTGATAAATTTCCTGTCATGGTTGAGAATAATCAATCCGATACTCCACACCAGGAAATTCCTTCTTTAGCATCAAGCTTAAATTATACTCATAGTAATCAATCTGGGAGTGTTGATCAGTGTTCCAGACCTTCAGAAGGAGTGATGGAAAGTGGATCATCTGCTTCTGCTGTCTATTCCGCTTTAAACCCCGATTTTTCAATGTTTGATGGAGAAATATGCTTGGACAAGCTATCCATCAGAGAACTTCATGAACTGTTTAAAGTAACTTTTGGTCGGGAAACTACCGTGAAAGACAAGCAGTGGCTGAAAAGGAGGATTGCCATGAGTTTAACAAACTCGCATGATGTTTCAGCAACAACGTTCATTATTAAAGATAACAAAATAATGAGAAAGTGTGAGGACAGTTCTGGAAATGGAGATTCTGAAAATGTAATCTCCATGGACAATCCAGCTGGAGAAGCAGATATTAACTTCAAGCACTCATCTGCTTTGGAGGGTTGTGTAACTGAAGATAATCAAGTTGTTTCTGAAATAAAACCTGGAAAACATGATATGGAAAATGGATTGAGAGTTGAGGATCACCAAAGAGCTGCAAAAAGAATTCGGAAGCCCACCAAGAGATATATTGAAGAGCTCTCTGAAACTGAATCTAGAGAGCCCAACCCCACAACGATGTTAAGTTCGAGTAGAAATTTTGGACCTGGACTTTCTACAACTTCATATGTGAGGCTTTCTAGGGATACTTGTTCAGAGATGAGAACATTTATCACCAGGGTAGACTCACTAGGAGGTTCTGATGTTCAAGTTCCTTGTGTTTCTCGGGTTCGAAGAAGTCATCCAAGGAAAGATATTACATCACTTACGAAGTTCCTTCCAATTGACGTGGCCAAGGATGCAAAATTAGATAATAAGGCTCTTGGAGAAAATGGTTCTTGTGCTGCTAGTGAGAATCCAGAAAAAGTCCTAAAGGCAAGATCCACACCTGGAAAGTTTCAGCCCATGAGAGCAACTGAGACTTTGCCTTCTTCTGAACCTGAGAAAGAGCAGCAGCTTCCAGGAGTAAGCACAAACGAGCCACAGCAGGAATCAAGGACGAAAAGGGCGGATCCACCCAGCCATCCTTCAGAGGACAATATAGTTACTGTTCCCACTGCTAAAGGTGGAATGAGGAGGAAACATCATCGCGCGTGGACTCCGGTCGAGGTAATGAAGTTGGTTGATGGTGTATCGCAGTGTGGCGCTGGGAAGTGGTCGGAGATCAAACGGCTCTCATTTTCATCACACTCATATCGTACCTCTGTTGATCTCAAGGACAAGTGGAGGAATTTGCTCAAGGCTAGCTTTGCGCAGACCCCGGCAGATGAAGGGATGAACGTGCGGAAGCATGGTACGGCTCCAATTCCTGAGACGATTTTGGTTCGAGTGCGAGAGCTTGCAGGGATGAATTCTCAGGCACCTCCAAATTTTAGCTCAAGAAAGTTGGTAGCTGGTGCTGGGAATGCACACGGACATAGATCAGGGTACTTGTAG 1971 0.4343 METVVAIEDNDDGKLEDIGVDRSSFALSSPKQIANPVVYKLVRVEGDGRLVPATDDEVMEMEDFLEHENSEMRVVADTGQSLECISIERSSSGKLRLECPKGTADADFGKLNAKLQMLQKVKQEERLRLSCESPVRSCAKKESQCSVDKFPVMVENNQSDTPHQEIPSLASSLNYTHSNQSGSVDQCSRPSEGVMESGSSASAVYSALNPDFSMFDGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSHDVSATTFIIKDNKIMRKCEDSSGNGDSENVISMDNPAGEADINFKHSSALEGCVTEDNQVVSEIKPGKHDMENGLRVEDHQRAAKRIRKPTKRYIEELSETESREPNPTTMLSSSRNFGPGLSTTSYVRLSRDTCSEMRTFITRVDSLGGSDVQVPCVSRVRRSHPRKDITSLTKFLPIDVAKDAKLDNKALGENGSCAASENPEKVLKARSTPGKFQPMRATETLPSSEPEKEQQLPGVSTNEPQQESRTKRADPPSHPSEDNIVTVPTAKGGMRRKHHRAWTPVEVMKLVDGVSQCGAGKWSEIKRLSFSSHSYRTSVDLKDKWRNLLKASFAQTPADEGMNVRKHGTAPIPETILVRVRELAGMNSQAPPNFSSRKLVAGAGNAHGHRSGYL 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121029g00008 656 MobiDBLite consensus disorder prediction 365 379 - -
Stsc121029g00008 656 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 26 635 - -
Stsc121029g00008 656 CDD SANT_TRF 542 592 - -
Stsc121029g00008 656 Gene3D - 531 639 - -
Stsc121029g00008 656 SMART sant 540 593 IPR001005 -
Stsc121029g00008 656 MobiDBLite consensus disorder prediction 479 508 - -
Stsc121029g00008 656 SUPERFAMILY Homeodomain-like 538 604 IPR009057 -
Stsc121029g00008 656 ProSiteProfiles Myb-like domain profile. 544 591 IPR001005 -
Stsc121029g00008 656 MobiDBLite consensus disorder prediction 358 379 - -
Stsc121029g00008 656 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 536 595 IPR017930 -
Stsc121029g00008 656 MobiDBLite consensus disorder prediction 454 538 - -
Stsc121029g00008 656 Pfam Myb-like DNA-binding domain 543 591 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121029g00008 Stsc-Chr121029 51686 58568 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc121029g00008 Myb_DNA-binding 1.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121029g00008 - - adu:107464756 1099.35