Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc121018g00004 | ATGATGTCAACAACAACAACAACTTCACAAACTATGGTTATTAATAACCAACAAAGCTTGTTTGGGGATCAAGATGATCATCATCAGAATATGGAAGCTTCAGAAATGGGGTTTCTTCCTCTTCTACCAACCACCATGATCTTCCCTACTTCTCCTCCTTTGGGATGCAATAATCATCATCCTCAACAACAACAACAACCCTTCTACTCCTTATTGAAACCCTTCTCTTCAATACTATCTCCAAATTCAATTGCATCTGATCAAGCTGATTCAACTTCAAACCTAACCGCTGAAACCCTACTCGCAACTACTGATGCACACCAAAAATCAACATTAGACCTCACTTCTACACCTTTTCTTGGACCTCAATTCCTCTCTTTGAACAGATCCACCGCTATCAACAATAATCCATGGGCAACGGGAGAAGTGCCTGATTGTTTCAGCAGTAAAAGAAATGTTATAGATAATCATCATTATCATCATCATAATCATCATGTGGGGGTTTCTACCATTAAGATGAAGAAAATGAAGGGAAGAAGAAAGGTTAGAGAACCTAGGTTTTGCTTCAAGACTCTCAGCGACGTCGATGTTTTGGACGATGGCTACAAATGGAGGAAGTATGGCCAAAAAGTCGTCAAGAACACGCAACACCCCAGAAGCTACTACCGTTGCACACAAGACAATTGTCGAGTAAAGAAACGAGTGGAGAGGTTAGCTGAGGATCCAAGAATGGTGATAACAACATATGAAGGAAGACATGCTCACATTCCATCCAATGATCTTGAAGACTCTCAATCTCCATCTCAACTTACCAACTTCTTCTGGTAG | 828 | 0.4058 | MMSTTTTTSQTMVINNQQSLFGDQDDHHQNMEASEMGFLPLLPTTMIFPTSPPLGCNNHHPQQQQQPFYSLLKPFSSILSPNSIASDQADSTSNLTAETLLATTDAHQKSTLDLTSTPFLGPQFLSLNRSTAINNNPWATGEVPDCFSSKRNVIDNHHYHHHNHHVGVSTIKMKKMKGRRKVREPRFCFKTLSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHIPSNDLEDSQSPSQLTNFFW | 275 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc121018g00004 | 275 | ProSiteProfiles | WRKY domain profile. | 193 | 255 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc121018g00004 | 275 | SMART | WRKY_cls | 198 | 257 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc121018g00004 | 275 | FunFam | WRKY transcription factor 57 | 184 | 258 | - | - | |
Stsc121018g00004 | 275 | Pfam | WRKY DNA -binding domain | 199 | 255 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc121018g00004 | 275 | Gene3D | WRKY domain | 185 | 251 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Stsc121018g00004 | 275 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 57 | 259 | IPR044810 | GO:0003700 | |
Stsc121018g00004 | 275 | SUPERFAMILY | WRKY DNA-binding domain | 191 | 255 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc121018g00004 | Stsc-Chr121018 | 34708 | 37477 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc121018g00004 | 168 | 275 | WRKY Transcription Factor Family | AT4G39410 | 81.416 | 5.29e-61 | 193 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Stsc121018g00004 | WRKY | 8.7e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc121018g00004 | - | - | adu:107480316 | 420.624 |