Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc121017g00014 | ATGGGCTGTGGCATATCGAAAGCATGCTGCTGGGGCACCCAAGATGATCAAGTTCCAGAGGCACAAATTGTTCAAAATGAAGATAGAATTGAGGGCAGTGACTTACCCCAGTTTCGAGAGTACACAATTGACCAGCTCAGGAAGGCTACATCTGGGTTTGCAGTAGAAAATATAGTTTCTGAGCATGGAGAAAAGGCACCAAATGTGGTCTATAAAGGGAAACTTGAAAATCAAATGCGAATAGCTGTCAAACGGTTCAACAAATTAGCCTGGCCAGATGCACAGCAATTTATGGGGGAGGCCAGAGCTGTAGGTCAGCTAAGGAACCAAAGATTGGTAAATCTCCTTGGATGTTGCTGCGACGGTGATGAAAGGTTGCTTGTAGCAGAGTTTATGCCTAATGAGACTTTGGCAAAGCACTTGTTTCATTGGGAAACTCAGCCCATGAAATGGGCAATGCGACTGAGAGTGGCTTTTCACCTTGCCCAAGCTTTGGAGTACTGTACCAGCAGGGGACGTGCACTATACCATGACCTAAATGCTTACAGAGTTCTTTTTGATGATGAATACAATCCTAAACTTTCATGCTTTGGTCTGATGAAAAACAGTCGAGATGGAAAAAGTTACAGTACGAATTTGGCATTTACTCCTCCTGAGTATCTGAGGACAGGTAGAGTTACTCCAGAGAGTGTAACTTATAGCTTTGGGACCCTTTTATTTGACCTTCTAAGTGGAAAACATATTCCTCCAAGCCATGCTCTTGATCTGATTAGGGACAGGAATGTTACAACACTAACAGACTCTTGTTTAGAGGGACAATTTTCAACTGATGAGGGGACTGAATTAGTACGTCTAGCCTCACGATGTTTACAAGCTGAACCGCGAGAGAGGCCTAATCCAAAGTCATTGGTTGCTGCTTTAATACCTCTCCAGAAAGATACCGAGGTTTCTTCTCTTGCCCTGATGGGCATACCAGATGGTGCTGCTGCATTTCCCCTTACTCCACTTGGTGAAGCATGTCAGCGAATGGATCTGACTGCCATACATGAGGTGTTGGAGAAACTTGGGTACAAAGATGACGAGGGTGCTGCAACTGAGCTTTCCTTCCAAATGTGGACCAACCAGATGCAGGAAACATTGAACTCAAAGAAGAAGGGTGATGCTGCTTTTCGGCAAAAGGAGTTTAGAACCGCAATTGATAGTTATACACAGTTCATTGATGTTGGAACCATGATTTCTCCTACGGTCTATGCACGACGTAGTCTGTGTTATCTCTTTAGCAACATGCCGGATGAAGCGCTTAAAGATGCATCACAGGCACAATCAATATCTCCTCTTTGGCACATAGCATCCTATCTACAAGCTGTTTGTCTCTTTGCGCTGGGCAGGGAGGCGGAGGCTCGAGTGGCCCTTAAAGAGGCCTCTTCTATGGAAACCAAAAAGAACACAAATTAG | 1455 | 0.4467 | MGCGISKACCWGTQDDQVPEAQIVQNEDRIEGSDLPQFREYTIDQLRKATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNKLAWPDAQQFMGEARAVGQLRNQRLVNLLGCCCDGDERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVAFHLAQALEYCTSRGRALYHDLNAYRVLFDDEYNPKLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLFDLLSGKHIPPSHALDLIRDRNVTTLTDSCLEGQFSTDEGTELVRLASRCLQAEPRERPNPKSLVAALIPLQKDTEVSSLALMGIPDGAAAFPLTPLGEACQRMDLTAIHEVLEKLGYKDDEGAATELSFQMWTNQMQETLNSKKKGDAAFRQKEFRTAIDSYTQFIDVGTMISPTVYARRSLCYLFSNMPDEALKDASQAQSISPLWHIASYLQAVCLFALGREAEARVALKEASSMETKKNTN | 484 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc121017g00014 | 484 | FunFam | probable serine/threonine-protein kinase At4g35230 | 28 | 131 | - | - | |
Stsc121017g00014 | 484 | ProSiteProfiles | Protein kinase domain profile. | 56 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc121017g00014 | 484 | Gene3D | Tetratricopeptide repeat domain | 373 | 484 | IPR011990 | GO:0005515 | |
Stsc121017g00014 | 484 | FunFam | probable serine/threonine-protein kinase At5g41260 | 133 | 324 | - | - | |
Stsc121017g00014 | 484 | SUPERFAMILY | Protein kinase-like (PK-like) | 34 | 313 | IPR011009 | - | |
Stsc121017g00014 | 484 | Gene3D | Phosphorylase Kinase; domain 1 | 27 | 131 | - | - | |
Stsc121017g00014 | 484 | FunFam | probable serine/threonine-protein kinase At4g35230 | 377 | 484 | - | - | |
Stsc121017g00014 | 484 | Gene3D | Transferase(Phosphotransferase) domain 1 | 133 | 324 | - | - | |
Stsc121017g00014 | 484 | PANTHER | SERINE/THREONINE-PROTEIN KINASE BSK5 | 16 | 482 | IPR045845 | GO:0004672|GO:0009742 | |
Stsc121017g00014 | 484 | Pfam | Protein tyrosine and serine/threonine kinase | 69 | 306 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc121017g00014 | 484 | SUPERFAMILY | TPR-like | 383 | 477 | IPR011990 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc121017g00014 | Stsc-Chr121017 | 68024 | 72218 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc121017g00014 | 41 | 318 | Receptor kinase-like Gene Family | AT3G58690 | 32.673 | 4.07e-42 | 152 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XII-1 | Stsc121017g00014 | PK_Tyr_Ser-Thr | 2.2e-28 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc121017g00014 | K14500 | - | gmx:100797107 | 817.379 |