Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121017g00007 ATGTCTGGATGCAATAAATCTCCAAAAAGTGATAAATATTCTATCAAATATAAGCAGAATCAACATGGGGGAAGTCTTTCTCGTGTGAATCATAAGCCTTCTGTTTCCAATAGTGAGAATAAGCAGTACTACACAAGTTCTGAGCCAAAGCCGAAGCACCCTCAGATACTGAGCCCCGCTCAGCTCATCTCTGCAGTGGGACAGATATGGGATTCTGCAAGACGCCCGCCGTCAGTTTTGCTTCGCGAGGAAAATGTGAGTCGAGATGATAAAGGATTCCCCATAAAAAATATTCCTGATGGCATTCATGTGGAAAGGGGTGGAGGGGTATGTAGTTCAACTAACACTAATTACTTTCATGTTAATGTGGGGGCTGCGGCATACGGTTCACAGATCGTACAGGAAAAGTTAGATTTCCCGACAGTAACACAGAAGGCATTGATTCTTCAATCTAGTAATGGAAGTGAAGAGCGTATTCATTCTTTGTTCCAGAGATTTTTGCAGCCCACTAAGAACAGTTTAAATGAATATTGGAAAGAAACAGAACTTGGGAGTGAGAAAATCTCATTTCAATTGCGAAATGTCTATTGGTGGATGAGTAGGAATGCACCTGAAGGACTTAAGTACCATGTGAAGGCTACAGATCTTGAGAACAAGAAAGATAATTCTCCAGTGGATGGGGACTGCATTTCAACAGATACAAGCACCTTGGCAGTGACTAACGAGAGTGATGTTTTCAATCCGGATTTAATTTTAGATGAAGATCTACCATTATCCAGTGATGCAACAATGGACACAGAAAATATTAGCACTCTGTGTTCGGATTATTTTCTTCCGGTTTTGCCTGACACTAATACTGATGTTGGTGCTGGCCAGATCTCGTCTGCTAGTATCTATGCAGATTGTCATATTAAATCTTTAGATACCTGTGATAGTGCTTCTGTGCAGTGCCAGAATAAGATTGACACTAATGAATTGCTGGAAATTCAAAGAAGACCTTTTACGGATATAACTGATCGGGAAGCTAAGGTTCAGAGCTTTGCAGCAACCCCTCAGAAGCCTTGTTATTCTGTTGCAAAGCAAGAGCATGCTTTTTCTGGTGCAATGGCTGGCGTATGTGTTAGCCTTTGTCTACATCCAGTTGACACTATTAAGACAGTTATTCAGTCATGCTGTGCAGAACAGAGGTCCATTGTTAACATTTGCAAATCGATTGTTTCTGATAGAGGATTGCTCGGACTATATCGTGGAATTACTACAAACATTGCTTGTTCTGCTCCAATTTCTGCAGTTTATACTTTCACATATGAATCTGTTAAAGCAGCTTTGCTTCCTTATCTTACAAAGGAGTATTATTCTTTTGCCCATTGTGTCGGTGGTGCTTCTGCAAGTATTGCCACCTCTTTTATATTCACTCCTAGTGAACGAATTAAGCAGCAGATGCAAGTTGGGTCTCATTACCGCAGCTGTTGGGATGCTTTGGTTGGAATTATCAGAAGTGGTGGTTTTCCATCCCTTTATGCAGGTTGGGGAGCTGTACTGTGCCGAAATGTTCCACATTCGATTATCAAGTTTTATACATATGAAAGCTTGAAGAAAGCGATGCCATCGTTGCCATCTAGTATTCAACCTAATGCATTTCAGACTGTAAGTTCACGTGTTACTTGTGCTTTCATGATCTTCATTTTGTCTCACTAA 1698 0.4081 MSGCNKSPKSDKYSIKYKQNQHGGSLSRVNHKPSVSNSENKQYYTSSEPKPKHPQILSPAQLISAVGQIWDSARRPPSVLLREENVSRDDKGFPIKNIPDGIHVERGGGVCSSTNTNYFHVNVGAAAYGSQIVQEKLDFPTVTQKALILQSSNGSEERIHSLFQRFLQPTKNSLNEYWKETELGSEKISFQLRNVYWWMSRNAPEGLKYHVKATDLENKKDNSPVDGDCISTDTSTLAVTNESDVFNPDLILDEDLPLSSDATMDTENISTLCSDYFLPVLPDTNTDVGAGQISSASIYADCHIKSLDTCDSASVQCQNKIDTNELLEIQRRPFTDITDREAKVQSFAATPQKPCYSVAKQEHAFSGAMAGVCVSLCLHPVDTIKTVIQSCCAEQRSIVNICKSIVSDRGLLGLYRGITTNIACSAPISAVYTFTYESVKAALLPYLTKEYYSFAHCVGGASASIATSFIFTPSERIKQQMQVGSHYRSCWDALVGIIRSGGFPSLYAGWGAVLCRNVPHSIIKFYTYESLKKAMPSLPSSIQPNAFQTVSSRVTCAFMIFILSH 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121017g00007 565 Gene3D Mitochondrial carrier domain 339 540 IPR023395 -
Stsc121017g00007 565 MobiDBLite consensus disorder prediction 17 52 - -
Stsc121017g00007 565 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 324 539 - -
Stsc121017g00007 565 ProSiteProfiles Solute carrier (Solcar) repeat profile. 451 534 IPR018108 -
Stsc121017g00007 565 MobiDBLite consensus disorder prediction 1 55 - -
Stsc121017g00007 565 Pfam Mitochondrial carrier protein 362 443 IPR018108 -
Stsc121017g00007 565 Pfam Mitochondrial carrier protein 452 535 IPR018108 -
Stsc121017g00007 565 SUPERFAMILY Mitochondrial carrier 362 563 IPR023395 -
Stsc121017g00007 565 ProSiteProfiles Solute carrier (Solcar) repeat profile. 358 442 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121017g00007 Stsc-Chr121017 35818 39393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121017g00007 366 535 Chloroplast and Mitochondria Gene Families AT2G30160 32.759 5.93e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121017g00007 - - lja:Lj4g3v2962350.1 670.233