Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121016g00004 ATGGCAGAGCTGAATGCGGCTGCAAGCTTCAAACCCAGCGATGAACAACTCATCCATTTCCTCTCAGACAAGCTCAAAGCTCAACCAATGGACGACAACGCCGCCATCAACATCCACGAATGTGACTACTTGTACGGCCGCACCAAGAATCCTTGGGACATTTGGCGTGACTTCGCCGGCGACGTTGATGCCGGCAGGACCGTTCTTTTCTTCTTCTCTCCCAACAAGAAGCACCCTTCCCCGGCTTCCCGCCCCATCGGAGCCGGTGTCTGGGAAGCTCAAGCCGAAAACATCGAGGGCGAAGCCATCATTGGGAATAAGGGGAAGAACCGCCGTATTGGAACCAAGAAATGTTTCTCCTTTGAGAAGAGTGGCACCTCCTACGACGGTGCATGGAGCTTGCATGAATACACTCTTCATGGATCGTTGCACTACACTAATAATACTTCAGTAATTACCGTTAATCAATGCATACTCGTTCAGGGAGATAATAATAGCTATGTGATATGCAAATTGATAAAGAATAGAGAAGTAGAGGTTGAGGCACAAGTTGGTGATAAAAGAAAAAGGCATAGCAATGCCCAATCTGCCACCACCGGTGTTCATGTTGAACATAATGCTCCTCATGCACATAGGAACACTAAAGACCAAGAGGTCCAATTCACACCCAATGAACTTGGCAGGCAAATGTTGTTGGACACATTTGACGGATTAACAGTAACAAACGAGAACGTTATCAGGAATCTCATGCAGCGAGGTGGAACAAGAAGAGGTGGAAAATCCCTTTAA 789 0.4728 MAELNAAASFKPSDEQLIHFLSDKLKAQPMDDNAAINIHECDYLYGRTKNPWDIWRDFAGDVDAGRTVLFFFSPNKKHPSPASRPIGAGVWEAQAENIEGEAIIGNKGKNRRIGTKKCFSFEKSGTSYDGAWSLHEYTLHGSLHYTNNTSVITVNQCILVQGDNNSYVICKLIKNREVEVEAQVGDKRKRHSNAQSATTGVHVEHNAPHAHRNTKDQEVQFTPNELGRQMLLDTFDGLTVTNENVIRNLMQRGGTRRGGKSL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121016g00004 262 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 196 - -
Stsc121016g00004 262 MobiDBLite consensus disorder prediction 185 215 - -
Stsc121016g00004 262 Gene3D NAC domain 13 179 IPR036093 GO:0003677|GO:0006355
Stsc121016g00004 262 SUPERFAMILY NAC domain 4 173 IPR036093 GO:0003677|GO:0006355
Stsc121016g00004 262 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
Stsc121016g00004 262 ProSiteProfiles NAC domain profile. 4 175 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121016g00004 Stsc-Chr121016 13938 15079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121016g00004 10 238 NAC Transcription Factor Family AT2G46770 23.305 1.14e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc121016g00004 NAM 1.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121016g00004 - - ahf:112756623 357.451