Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121015g00006 ATGAACCAAGAACGAGTGAGGCACAATCAAACGATTCAAGAAGCAGCAGCTGAAAGAGCAAGGGAAGCAAATAAAGGTAAGGCAAGAGAAGTTGTGCCAAATTCAGAAGAGGAAGAATCAGAGGAGCTACACTCAAGTGCATCCGAGGAATGTGAAACTACCGTTCCTTCAGAGAACGTAGCCATTAACTGTGGTGCTATTGCATCACAAGTTATGAACTATGGTGGTAGGAATTGGACTGGTGATGTTCGTAATAAATCTCTAATAGCAGAAGCCCCTGCCATTCTTCTTGATTCTGTTCCTCAAGTTCCATATATGACTGCTCGGATTTTTCGGTCGCCGTTCACCTACAAATTCAATGTAACACCAGGTCCGAAATTCATCCGTCTTCACTTCTATCCAGCTTCTTACTTGAACATGAATGCCTCCAAAGCTTTTTTATCTGTTACGGCTGCTAACAACTTCACTCTGCTGCACAACTTCAGTGTTTCCTTAAACACAGACTACTTCAATGTACCATATTTGATGAAAGAATTCATCATCTATGTAAGTGGAAGGAGTTTGGAACTCACATTCTCCCCATCATTATCCAATGACAATGATGCCTATGCATTTGTGAATGGGATTGAAGTGGTTTCAATGCCATCTAACTTATACCAGCGTTGTCTTGATGCCCCTCTACCATTAAATGCAGGAGGTGATCAAATTACCGCGGAATATGATACAGGGATGTTTTGGACGTGGGAGGCAGACGATTGTTACATATTTGGGACTACTATAGGTGTTGAACCCTTTAATATGACCATTCCAGTTTTTTATGCAAATGGTGTTCCTGCTTATGCAGCCCCAAAAGATGTCTACCGCACTTACCGTTCAATGGTTCCCTTTCCGTTAAGCGCAGTCAACTTAAACTACAACCTAACGTGGTTTTTCCATGTTGATTCAGGCTTCAGCTATCTAGTTAGGCTACACTTTTGTGAAACTGAGAGCCTAATAACCAAGAACAATCAAGTTGTATTTACTATATACTTAAATAATCAAACAGCTTATGCAGGTTTTGATCCAATAGCCATGAGTTGGGGCCCTGGAGTTGGTATGTACCAAGATTATGTGGTAATTGTTCCTGGAGCTAGTGAGGCCAAACAAGATTTATGGCTTGATCTCCACCCATATAAGAAATCCAAACCCATGTACTACACTTCATACTTGAATGGTGTAGAGGTCTTTAAACTATGCAGTACCGATAAGAAGAATCTTTCTGGGCTTAACCCTTCTCCTCTCGAAAGTAATTCCACAACATCAGGTGTAAAAGCTTCTCACGATTTAGTTAAAAACTTGAAGAAACTCAAGTTCACCATCCTCATTGGATGTGGAATTGCTGCATTGGTTATACCATTTCTGATATGGCTAATTCTATGCAAGATTATTCGGCCAAGGAGGATCATGTCATGGTTTGATCTCTTTGTCATCAAAACTAACAATGTCAAAGAGTCAAATATGAGACCGTTTGGTGCTGCTCATATGTCATTGCAAAAGATAAAGGAAGCAACAGGGAACTTCGACGAGGCTCTAATCATTGGAATAGGTGGATTCGGAAAGGTTTACAAGGGTAGCTTTGATGCTGGAAATACTTATGTAGCCGTAAAGCGTGGTGATTGGTTGTCAGAACAAGGTGCCTTGGAGTACAAGACTGAGATCGATTTGTTATCGAAGCTGCGACATCACAACCTGGTGTCTCTTTTGGGCTACTGCAATGAAGATGAGGAGATGATACTGGTGTATAACTTCATGGACAATGGGACGCTCTATGATCATCTCCATTTGAGACAGAGTGAACAACCTCCTTTGTCATGGGTTCAACGTCTCGATATATGCATCGGAATTGCAAAAGGTTTGCACTATCTACACACAGGGACACAGCACAGGATCATTCACCGCGACATCAAGACGACCAACATACTCTTAGACAATAATTTGGTGGCCAAAATTTCTGACTTTGGGTTGTCAAAGTCAAGCTACCCATCTTGTAGCACCACCAATGTAAAGGGAAGTGCTGGTTACCTTGATCCAGAGTATTATAAATTCCACAAGTTGACTCAGAAATCCGATTTATACTCACTCGAGGTTGTGCTGCTGGAGGTTCTAAGTGCAAGGCCGGCTGTGAGTCAAGGTGGTGTCCATGACGACAATGAGGAGCCTCTGATGTTGGCTGAATTTGCTACGTCATGCTTTGAGAATGGCAATTTGGAGCAATTACTAGATCCAATTATTGAAGGAGAGATAATAAAGGAGTGCTTTGAGGTATATTTAGGAATTACAATGAGGTGTTTGGCTGAAAGAGGCGTGGAAAGGCCATCTACCGGTGACGTTCTGCAGAATCTTGAACTCGCAAAGCGATTGCAGAAGAATGATGGTGTTGCTGTGAGGGAAACATGCATGGGAATCGTAATTATCCTCAACAGGATAATTCAGATTTGA 2478 0.4177 MNQERVRHNQTIQEAAAERAREANKGKAREVVPNSEEEESEELHSSASEECETTVPSENVAINCGAIASQVMNYGGRNWTGDVRNKSLIAEAPAILLDSVPQVPYMTARIFRSPFTYKFNVTPGPKFIRLHFYPASYLNMNASKAFLSVTAANNFTLLHNFSVSLNTDYFNVPYLMKEFIIYVSGRSLELTFSPSLSNDNDAYAFVNGIEVVSMPSNLYQRCLDAPLPLNAGGDQITAEYDTGMFWTWEADDCYIFGTTIGVEPFNMTIPVFYANGVPAYAAPKDVYRTYRSMVPFPLSAVNLNYNLTWFFHVDSGFSYLVRLHFCETESLITKNNQVVFTIYLNNQTAYAGFDPIAMSWGPGVGMYQDYVVIVPGASEAKQDLWLDLHPYKKSKPMYYTSYLNGVEVFKLCSTDKKNLSGLNPSPLESNSTTSGVKASHDLVKNLKKLKFTILIGCGIAALVIPFLIWLILCKIIRPRRIMSWFDLFVIKTNNVKESNMRPFGAAHMSLQKIKEATGNFDEALIIGIGGFGKVYKGSFDAGNTYVAVKRGDWLSEQGALEYKTEIDLLSKLRHHNLVSLLGYCNEDEEMILVYNFMDNGTLYDHLHLRQSEQPPLSWVQRLDICIGIAKGLHYLHTGTQHRIIHRDIKTTNILLDNNLVAKISDFGLSKSSYPSCSTTNVKGSAGYLDPEYYKFHKLTQKSDLYSLEVVLLEVLSARPAVSQGGVHDDNEEPLMLAEFATSCFENGNLEQLLDPIIEGEIIKECFEVYLGITMRCLAERGVERPSTGDVLQNLELAKRLQKNDGVAVRETCMGIVIILNRIIQI 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121015g00006 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Stsc121015g00006 825 Gene3D Transferase(Phosphotransferase) domain 1 597 813 - -
Stsc121015g00006 825 FunFam FERONIA receptor-like kinase 59 215 - -
Stsc121015g00006 825 CDD STKc_IRAK 526 795 - -
Stsc121015g00006 825 Gene3D - 59 215 - -
Stsc121015g00006 825 Gene3D - 226 410 - -
Stsc121015g00006 825 SMART serkin_6 520 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121015g00006 825 FunFam Os07g0541700 protein 597 685 - -
Stsc121015g00006 825 Gene3D Phosphorylase Kinase; domain 1 487 596 - -
Stsc121015g00006 825 MobiDBLite consensus disorder prediction 11 41 - -
Stsc121015g00006 825 MobiDBLite consensus disorder prediction 1 54 - -
Stsc121015g00006 825 FunFam receptor-like protein kinase FERONIA 488 596 - -
Stsc121015g00006 825 PANTHER OS03G0124300 PROTEIN-RELATED 45 473 IPR046957 GO:0004672
Stsc121015g00006 825 Pfam Malectin-like domain 62 410 IPR024788 -
Stsc121015g00006 825 Pfam Protein kinase domain 525 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121015g00006 825 FunFam FERONIA receptor-like kinase 223 412 - -
Stsc121015g00006 825 ProSitePatterns Protein kinases ATP-binding region signature. 526 549 IPR017441 GO:0005524
Stsc121015g00006 825 ProSiteProfiles Protein kinase domain profile. 520 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121015g00006 825 SUPERFAMILY Protein kinase-like (PK-like) 510 800 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121015g00006 Stsc-Chr121015 51938 58653 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121015g00006 56 803 Receptor kinase-like Gene Family AT3G51550 46.173 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc121015g00006 Malectin_like 3.7e-28 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121015g00006 - - tpra:123911549 937.562