Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121015g00005 ATGTGCATTATTTTTGTTTTTATTTTCAATCTTTTGCAATTACAACTGTTTGCTCTTGCGGACAGTAGCACTTACGTTCCTTCAGAGAACATAGCTATTAACTGCGGCTCTATTGCATCACAAGTTCAACACTATGGTGGTAGGAATTGGACTGGCGATGTTCCTAATAAATCTCTAATAGCAGAAGCCCCTGCCATTGTTGATTCTGTTCCTCAAGTTCCATATATGACTGCTCGGATTTTTCGGTCGCCGTTCACCTACAAATTCAATGTAAAACCAGGTCCAAAATTCATCCGTCTTCACTTCTATCCAGCTTCTTACTTGAACATGAATGTCTCCAAAGCTTTTTTATCTGTTACCGCTGCTAACAACTTCACTCTGCTGCACAACTTCAGTGTTTCTTTGAACACAGACTACTTCAATGTACCATATTTGATGAAAGAGTTCATCATCTATGTAAGTGGAAGGAGTTTGGAACTCACATTCTCCCCATCATTATCCAATGCCACTGATGCATATGCATTTGTGAATGGGATTGAAGTTGTTTCAATGCCATTTAGCTTATACCATTCTTGTCTTGATTCCCCTCTACCATTAGTTGGTCATTATCCTGCTTTATACTACATCTGTGATGATATTGCCATGGAAACCTTGTTCAGATTAAATGTAGGAGGTGATCAAATTGCACCAGAATATGATGAAACAGGGATGTTTCGGACGTGGGAGGGCGACGATACGTACATATTTGGAGCTGGTAAAGGTATTGAACCCGTTGATATGACCATGCCAGTTCTGTATGCAAATGGTGTTCCTTCTTATGCAGCACCAAAAGATGTCTACCGCACTTCGCGTTCGATGAGTCCTTTTCCGGCAGGCTTGATCAACTTAAACTATAACCTAACATGGCTTTTCCATGTTGATTCTGGCTTCAAGTATCTAGTTAGGCTTCACTTCTGTGAAATTGATAGCCTAATAACCAAGGTCAACCAAGTTGTATTTAGTATCTACTTAAATAATCAAACAGCTTATGCAGGTTTTGATCCAATAGCCGTGAGTGGGGGCCCTGGAGTTGGTATGTACCAAGATTATGTGGTAATTGTTCCTGGATCTAGTGAGGCAAAGCAGGATTTGTGGCTTGATCTCCACCCATACAAGTATTCCAAACCTATGTACTACACTTCATACTTGAATGGTGTGGAAATCTTTAAACTAAGTAGTACCTATGACAAGAATCTTTCTGGGCTCAATCCTTCTCCTCTCAAAAGCCATTCCAGATTAGGAGCAAACGCTTCCCACAATGTATCTAAAAATAAAAAGAAAATCAAGTTCACCATCCTCATTGGATGTGGAATTGCTGCTGCATTAGTTATACCAATTCTCCTATGGCTAATTCTATGCAAGATTATTCGGCCGAAGAGGAGGATGATGCCATGCTTTGATCTCTTTGCCATCAAGACTAACATTGTCAAAGAGGAAAACAAGACACCCTTTGGCGCTCATATGTCATTGCAAAAGATAAAGGCAGCAACAAGCAACTTCGATGAGACTCTAATGATCAGCAAAGGTGGATTCGGAAAGGTTTACAAGGGTAGCTTTGATGCTGGAAATACTTATGTAGCCGTAAAGCGTGGTGATAGGTTGTCAGAACAAGGTGCCTTGGAATACAAGACAGAGATCGATTTGCTCTCGCAGTTGCGGCATCACAACCTGGTGTCTCTTTTAGGCTACTGCAATGAAGATGAAGAGATGATACTGGTGTATAACTTCATGGACAATGGAACACTCTATGATCATCTTCATTTGAGACAGAGTGATCAAAATCAAACTCCTTTGTCTTGGATCCAACGACTCAATATATGCATTGGAGTTGCAAAAGGCTTGCACTATCTACACACAGGGACACAGCACATGATCATTCATCGCGACATCAAGACAACCAACATACTCTTAGACAATAATTTGGTGGCCAAAATTTCTGACTTTGGGTTGTCAAAGTCAAGCTACCCATCTTGTAGCACCACCAATGTAAAGGGAAGTGCTGGTTACCTTGATCCAGAGTATTATAAATTCCACAAGTTGACTCAGAAATCGGATTTATACTCACTTGGGGTTGTGCTGCTGGAGGCTCTAAGTGCGAGGCCTGCTGTGAGTCAAGGCGGCGACCACGACAACGACGAAGACGAGGAGCCTCTTATGTTGGCTGAATTTGCTAAGTTATGCTTTGAGAATGGCAATTTGGAGGAGATAGTAGATCCCATTATTCAAGGAGAGATAGTAGAGGAGTGCTTAGAGGTATATTTAGGAGTTGCAATGAGGTGTTTGGCTGAAAGGGGCTTGGAGAGGCCGTCCACTGCTGATGTTCTGCAGAATCTTGAAATCGCAAAGCGATTGCAGGAAAATGGTGGTGTTATTCCTCGTGATGGAAATAAGCAAGGGAATGGTAATCATGCTTTACAGGGCAATTCAGATTTGACTCCTGGGATTGAGTTTAGTGACCTCATGATTCCTCTTGGTAGATGA 2520 0.4155 MCIIFVFIFNLLQLQLFALADSSTYVPSENIAINCGSIASQVQHYGGRNWTGDVPNKSLIAEAPAIVDSVPQVPYMTARIFRSPFTYKFNVKPGPKFIRLHFYPASYLNMNVSKAFLSVTAANNFTLLHNFSVSLNTDYFNVPYLMKEFIIYVSGRSLELTFSPSLSNATDAYAFVNGIEVVSMPFSLYHSCLDSPLPLVGHYPALYYICDDIAMETLFRLNVGGDQIAPEYDETGMFRTWEGDDTYIFGAGKGIEPVDMTMPVLYANGVPSYAAPKDVYRTSRSMSPFPAGLINLNYNLTWLFHVDSGFKYLVRLHFCEIDSLITKVNQVVFSIYLNNQTAYAGFDPIAVSGGPGVGMYQDYVVIVPGSSEAKQDLWLDLHPYKYSKPMYYTSYLNGVEIFKLSSTYDKNLSGLNPSPLKSHSRLGANASHNVSKNKKKIKFTILIGCGIAAALVIPILLWLILCKIIRPKRRMMPCFDLFAIKTNIVKEENKTPFGAHMSLQKIKAATSNFDETLMISKGGFGKVYKGSFDAGNTYVAVKRGDRLSEQGALEYKTEIDLLSQLRHHNLVSLLGYCNEDEEMILVYNFMDNGTLYDHLHLRQSDQNQTPLSWIQRLNICIGVAKGLHYLHTGTQHMIIHRDIKTTNILLDNNLVAKISDFGLSKSSYPSCSTTNVKGSAGYLDPEYYKFHKLTQKSDLYSLGVVLLEALSARPAVSQGGDHDNDEDEEPLMLAEFAKLCFENGNLEEIVDPIIQGEIVEECLEVYLGVAMRCLAERGLERPSTADVLQNLEIAKRLQENGGVIPRDGNKQGNGNHALQGNSDLTPGIEFSDLMIPLGR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121015g00005 839 FunFam receptor-like protein kinase FERONIA 482 589 - -
Stsc121015g00005 839 FunFam FERONIA receptor-like kinase 213 405 - -
Stsc121015g00005 839 Gene3D Transferase(Phosphotransferase) domain 1 590 805 - -
Stsc121015g00005 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Stsc121015g00005 839 PANTHER OS03G0124300 PROTEIN-RELATED 2 463 IPR046957 GO:0004672
Stsc121015g00005 839 FunFam FERONIA receptor-like kinase 30 185 - -
Stsc121015g00005 839 SUPERFAMILY Protein kinase-like (PK-like) 496 794 IPR011009 -
Stsc121015g00005 839 FunFam Os07g0541700 protein 594 680 - -
Stsc121015g00005 839 Gene3D Phosphorylase Kinase; domain 1 483 589 - -
Stsc121015g00005 839 Gene3D - 30 184 - -
Stsc121015g00005 839 Gene3D - 213 403 - -
Stsc121015g00005 839 ProSiteProfiles Protein kinase domain profile. 513 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121015g00005 839 Pfam Protein kinase domain 519 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121015g00005 839 MobiDBLite consensus disorder prediction 802 824 - -
Stsc121015g00005 839 CDD STKc_IRAK 519 792 - -
Stsc121015g00005 839 Pfam Malectin-like domain 33 403 IPR024788 -
Stsc121015g00005 839 SMART serkin_6 513 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121015g00005 Stsc-Chr121015 31285 33842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121015g00005 19 801 Receptor kinase-like Gene Family AT3G51550 47.433 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc121015g00005 Malectin_like 4.5e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121015g00005 - - gmx:100776859 1043.49