Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121014g00012 ATGGGAAGTAGCAGCAGCAGTGAAGAGCTCTTGAAAGCACTTTACCCTTTTTTCCAAAGTGTTTCTTCAAATTCCCCACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCCTCTTCTCACCCTCTTCCTCCACCACTTCCTCCATAGGCCTCAACAAACTCACCCCATCACAAATCATTCAAATCCAACTCCAATTCCAACTCCAACAGCAACAACTTATGCCTGCTACCACCAACCCAACCCAATTCTGCACCTACAACCAAAACCACCACGAATCCCTCACCTTCCTTTCCCCAAAGAGGGTCCCCATGAAGCACGTGGCCACCACCACCCCCCCAAGCAAAGCCAGAAAGCTTTACCGCGGTGTAAGGCAGAGACATTGGGGCAAGTGGGTGGCGGAGATCAGACTCCCCAAGAACCGAACCCGTCTGTGGCTGGGAACCTTCGACACCGCAGAGGAAGCAGCTTTGGCATACGACAACGCAGCTTACAAGCTTCGCGGTGAATTCGCACGCCTTAACTTCCCTCACCTTAAGCACCATGGCACCCGCGTGTTCGGTGAGTTTGGTGAGTACAAGGCTCTCCCTTCGTCCGTGGATGCGAAGCTGCAAGCCATTTGCGACAACTTGGCTGTTTCTCAGCAGCAGGAGATGATCCAAACAGAGGAGGCATGTTCCTCTGTTGTGAAGGTGGAGCAAGTAGATGAGGTTGCAGCAGCAGCAGCAGAGCCTCAAGATCAAGTAGTGGAGGATTTCAAGGTGGTGGATTGGGATGAATCTTCTTCCCCTGAATCGGGTGTGAGTGTGACGAATCTTTTTGATTTCTCGGATTACTGCAAGTGGGAGGAACCGGTGAGTTTTGGGCTGGAGAAGTTCCCTTCCGTGGAGATTGATTGGGCAGCCATATGA 927 0.5092 MGSSSSSEELLKALYPFFQSVSSNSPPSSSSSSSSSSSSSSSFLFSPSSSTTSSIGLNKLTPSQIIQIQLQFQLQQQQLMPATTNPTQFCTYNQNHHESLTFLSPKRVPMKHVATTTPPSKARKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAYKLRGEFARLNFPHLKHHGTRVFGEFGEYKALPSSVDAKLQAICDNLAVSQQQEMIQTEEACSSVVKVEQVDEVAAAAAEPQDQVVEDFKVVDWDESSSPESGVSVTNLFDFSDYCKWEEPVSFGLEKFPSVEIDWAAI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121014g00012 308 SMART rav1_2 125 188 IPR001471 GO:0003700|GO:0006355
Stsc121014g00012 308 PRINTS Ethylene responsive element binding protein signature 126 137 IPR001471 GO:0003700|GO:0006355
Stsc121014g00012 308 PRINTS Ethylene responsive element binding protein signature 148 164 IPR001471 GO:0003700|GO:0006355
Stsc121014g00012 308 FunFam Ethylene-responsive transcription factor 2 124 183 - -
Stsc121014g00012 308 MobiDBLite consensus disorder prediction 21 40 - -
Stsc121014g00012 308 Pfam AP2 domain 126 175 IPR001471 GO:0003700|GO:0006355
Stsc121014g00012 308 Gene3D AP2/ERF domain 125 183 IPR036955 GO:0003700|GO:0006355
Stsc121014g00012 308 ProSiteProfiles AP2/ERF domain profile. 125 182 IPR001471 GO:0003700|GO:0006355
Stsc121014g00012 308 SUPERFAMILY DNA-binding domain 125 183 IPR016177 GO:0003677
Stsc121014g00012 308 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 10 308 - -
Stsc121014g00012 308 CDD AP2 124 184 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121014g00012 Stsc-Chr121014 75215 76141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121014g00012 8 308 AP2-EREBP Transcription Factor Family AT4G39780 46.844 6.57e-73 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Stsc121014g00012 AP2 4.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121014g00012 K09286 - gmx:100818839 253.447