Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121013g00009 ATGATGAGTGTTATCCTTGCTACTCTCCTCTTACTAATCCCAGTTCTTCTTCTTTTGATTAGAAGAAGAAGAACATCTAAAAGGGTACCACCTGGCTCACTTGGAATACCAATCATTGGTCAAAGCCTTGGCCTTCTGAGAGCTATGTGTGCAAACAATGCAGAGAAATGGATCGAACAAAGGATCAGAAAGTATGGTCCTGTTTCAAAGCTAAACTTGTTTGGAAAACCAACTGTTTTGATCCATGGACAGGCTGCAAACAAGTTCATATTCTCTAACAATGAAGGCACGCTTTCTAACCAGCAAACACAGTCTGTTAAGATGATCTTGGGTGACCGGAATGTGCTCGAACTCAGTGGCGAAGATCATAAGCGAGTCAGAAGCGCACTCATGTCGTTCCTCAAGCCGGAATCATTGAAGCTGTATGTGGGGAAGATTGATGAGGAAGTTAAGCGGCACCTTGAGATGCATTGGAATGGAAAACAGCAAGTTAAGGTGTTACCTCTGATGAAGACGCTCACATTCAACTTAATTTGCTCTCTTTTGTTTGGTCTTGAGCGTGGAAAGCAAAGAGATCAGTTCCTAGGTTCATTCCAGAGAATGATTGAAGGAATGTGGTCGATTCCTATTAACTTGCCGTTCACACGATACAATCGAAGCCTCAGAGCAAGTGCAAGGATCCAGAAGATGTTGAAGCAGATTATGAACAAAAAAAAGGTTGAACTTGAGAGAAATGAAGCCTCCACTCACCAAGATTTGATCACTTGCTTGCTTGGCATAAAAGGTGATGGTGATGAACAAGTTATCACTGAGAAGGAAATCATTCATAATAGCATGCTTGTCATGGTTGCTGGATATGACACTTCATCTGTTGTAATCACTTTCATTATCAGACTCTTAGCTATTGAACCTGCAATTCTTGCAGCAGTTCTTCAAGAACAAGAAGAGATAGCAAAAAGCAAGAAATCAGGAGAGTCTCTAACATGGGAGGACCTTGGAAAGATGAAGTACACATGGAGAGTAGCATTGGAAACTCTTAGGCTGTTTCCTCCTATCTTTGGTGGCTTCAGAAAGACAATGACAGATATTGAATATGATGGATACATTATTCCCAAAGGGTGGCAGATCTTCTGGGTTACATCAATGACTCAAATGGACAATAGCATATTCCCAGAGCCATCAAAGTTTGATCCAAGTAGATTTGAAGACCAATCATCTATTCCACCATACTGCTTCATTCCATTTGGAGCTGGATCAAGAATCTGTCCAGGGTATGAGTTGGCCAAGATTGAAACTCTTGTTTCAATCCATTATCTGGTGACAAGATTCAGTTGGAAATTATGTGCAGACAATAACTTCAAGAGGGATCCAATGCCAGTTCCTACTCAAGGTCTTCCAATAGAGATTTGGCCAAGGAAAACTGTTTCTTAA 1431 0.4109 MMSVILATLLLLIPVLLLLIRRRRTSKRVPPGSLGIPIIGQSLGLLRAMCANNAEKWIEQRIRKYGPVSKLNLFGKPTVLIHGQAANKFIFSNNEGTLSNQQTQSVKMILGDRNVLELSGEDHKRVRSALMSFLKPESLKLYVGKIDEEVKRHLEMHWNGKQQVKVLPLMKTLTFNLICSLLFGLERGKQRDQFLGSFQRMIEGMWSIPINLPFTRYNRSLRASARIQKMLKQIMNKKKVELERNEASTHQDLITCLLGIKGDGDEQVITEKEIIHNSMLVMVAGYDTSSVVITFIIRLLAIEPAILAAVLQEQEEIAKSKKSGESLTWEDLGKMKYTWRVALETLRLFPPIFGGFRKTMTDIEYDGYIIPKGWQIFWVTSMTQMDNSIFPEPSKFDPSRFEDQSSIPPYCFIPFGAGSRICPGYELAKIETLVSIHYLVTRFSWKLCADNNFKRDPMPVPTQGLPIEIWPRKTVS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121013g00009 476 PANTHER CYTOCHROME P450 26 27 460 - -
Stsc121013g00009 476 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121013g00009 476 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121013g00009 476 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121013g00009 476 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121013g00009 476 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121013g00009 476 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121013g00009 476 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121013g00009 476 Gene3D Cytochrome P450 20 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121013g00009 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Stsc121013g00009 476 CDD CYP90-like 61 471 - -
Stsc121013g00009 476 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121013g00009 476 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121013g00009 476 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121013g00009 476 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121013g00009 476 FunFam Taxadiene 5-alpha hydroxylase 20 472 - -
Stsc121013g00009 476 SUPERFAMILY Cytochrome P450 21 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121013g00009 476 Pfam Cytochrome P450 30 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121013g00009 Stsc-Chr121013 72769 75024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121013g00009 1 452 Cytochrome P450 AT5G45340 32.230 4.05e-78 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121013g00009 - - gmx:100790001 748.043