Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121013g00001 ATGCCAGAGGCAAGCAGAGTTGATTCTTTTTGTTTGTCTGACTTTGATCAATCAGTTGGAAATCACTTGGAGAATGCTGTCGAATTGAATGGAAATCCTGTACATAACTTGCTGAAAGTTAGTAGTCAGACGATTTCTCCCGGTCCTGTTCACCTTGGTACTTCTGATCGGTTGCCAACTTCAGTTGATAAAGGCCAATTTACATACCTAGAAGACCGATTGAGCTTGCTGGCACAAAAGCTTCGATCAACAAATCAAGTGATAATACCAAGCTGTGATACAGAAAACCAAGAATGGTCAGCCATGGCGGATGGCAGTCCCAGAACTGATATTTCTACAGATGCTGATACTGATGATAAGAATCAGCGGTTTGATGGAGGCCAATCCCTTGCTATTGGGGGTTCAGACTCAAGTGACAGATCGAAGGATAAAACAGATCAGAAGACTCTCCGCAGGCTTGCTCAGAATCGTGAGGCCGCAAGGAAAAGTCGATTGCGAAAGAAAGCTTATGTTCAACAGTTGGAAAGTAGTCGTTTGAAGTTGACGCAATTGGAGCAAGAGCTTCAGCGAGCCAGGCAGCAGGGAATCTTCATATCAAGTTCAGGTGATCAAGCGCATTCCATGAGCGGAAATGGGGCCATGGCATTTGATGTAGAATACGCGAGGTGGCTGGAAGAGCAGAATCGACAAATTAATGAGCTTAGAGCTGCTGTAAATTCTCATGCAAGTGATACAGAACTTCGAATGATTATTGATGGTGTATTGGCACATTATGATGAGATATTTCGGCTGAAGGGCATTGCAGCTAAGGCTGATGTCTTCCACTTGTTGTCTGGCATGTGGAAAACCCCAGCAGAGAGGTGTTTTCTCTGGCTTGGTGGTTTTCGGTCATCTGAACTCCTTAAGCTCCTGGTAAATCAATTGGAGCCTCTCACAGAGCAGCAGTTGGTGGGTATTACCAACTTACAGCAATCTTCTCAACAGGCAGAAGATGCATTGTCTCAGGGTATGGAAGCACTGCAACAATCCCTTTCGGTGACTTTGTCCTCTGGATCACTTGGCTCGTCCGGTTCGTCAGGGAATGTGGCAAATTACATGGGTCAAATGGCCATGGCCATGGGTAAGCTAGGGACACTCGAGGGCTTTATTCGGCAGGCTGACAATTTGCGCCAGCAGACTTTGCAACAAATGCACCGCATATTGACGACTCGCCAATCGGCTCGCGCCCTCCTTGCAATACATGACTACTTTTCGAGGCTGCGCGCTCTTAGCTCCCTCTGGCTCGCCCGCCCAAGAGATTGA 1302 0.4693 MPEASRVDSFCLSDFDQSVGNHLENAVELNGNPVHNLLKVSSQTISPGPVHLGTSDRLPTSVDKGQFTYLEDRLSLLAQKLRSTNQVIIPSCDTENQEWSAMADGSPRTDISTDADTDDKNQRFDGGQSLAIGGSDSSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMSGNGAMAFDVEYARWLEEQNRQINELRAAVNSHASDTELRMIIDGVLAHYDEIFRLKGIAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLSVTLSSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121013g00001 433 MobiDBLite consensus disorder prediction 97 150 - -
Stsc121013g00001 433 PANTHER TRANSCRIPTION FACTOR TGA9 91 432 - -
Stsc121013g00001 433 Pfam Seed dormancy control 230 305 IPR025422 GO:0006351|GO:0043565
Stsc121013g00001 433 SMART brlzneu 144 207 IPR004827 GO:0003700|GO:0006355
Stsc121013g00001 433 Pfam bZIP transcription factor 148 188 IPR004827 GO:0003700|GO:0006355
Stsc121013g00001 433 Gene3D - 147 199 - -
Stsc121013g00001 433 Coils Coil 167 194 - -
Stsc121013g00001 433 SUPERFAMILY Leucine zipper domain 148 191 IPR046347 GO:0003700|GO:0006355
Stsc121013g00001 433 FunFam BZIP family transcription factor 147 196 - -
Stsc121013g00001 433 Coils Coil 224 244 - -
Stsc121013g00001 433 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 151 166 IPR004827 GO:0003700|GO:0006355
Stsc121013g00001 433 ProSiteProfiles DOG1 domain profile. 213 430 IPR025422 GO:0006351|GO:0043565
Stsc121013g00001 433 CDD bZIP_HBP1b-like 148 200 - -
Stsc121013g00001 433 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 146 190 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121013g00001 Stsc-Chr121013 12712 18658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121013g00001 102 433 bZIP Transcription Factor Family AT3G12250 78.916 0.0 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc121013g00001 DOG1 2.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121013g00001 K14431 - gmx:100816123 643.269