Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121004g00006 ATGGCAATTCATCATCAGTTTTACACCAATCAACTATCTCTGCCTCTACTACTACTGCTTGTTATTCAATTCTCATCACTTCAGTTCCAGTCTCATGGATATTATACCCAAGACAAGTACTTCATCAATTGCGGATCGAGCAGCAATGCTAAGGACACCGAAAGTGGGAAGACTTACGTTGCGGATTCGAGCCAAGTCAGTTTTAGCAAGCGAAGCAAAACAGAAACCAACCAATCATCAGTTCCTTCACCTATCTACCAAACAGCAAGAATCTTCACAACTCAATCATTCTATGAGTTCCCAATTGACACAGCTGGCACCTACATGGTACGCCTTCACTTCCTTGCTTTCACTTCACCAAGTAACCTCTCTTCTGCAACCTTCAACGTCTCGGTTCTTAATTTCATGCTGCTGCAAAACTTCACAACCAAGAACTACACAAAATCTCCTCTGGTTAAAGAGTATTACATGAAGATACCTCTTGGTAAATTCAAAATCACTTTCACCCCTCTTTCTCTCTCGTTTGCCTTTGTGAATGCCATTGAAGTCTTCCTACTCCCTCGCTTCTTAATCGCTGATGAAGTCTCAGGTTTTATTCCACAACCTGCAATTGGACAAGATTCCTTGTTCAAATACAGAGGGGTACTCTCTCTAGCGTTGGAAACTAAACACAGGATCAACGTTGGTGACACTAACGTCACAAGTAACGCAGATCCCTTATGGAGAACCTGGTCTTCTGATGACACTTACCTTGTTAATACTCAAAATGCCAAAGATTTTAAATATGGTGGCACTATTCAGCCCAAGGTAGGATATGATGTCGACGGTCCAAATGCTAATAGCTATACTGCGCCGTTTGGTGATGTTTACGGAACAGCTAAATGGACGATTAATGGCTCCAACTTAACCTGGAGTCTTCCTGTGGAAAAGAATGTAGACCATCTCATTCGGTTTCACTTCTGTGATTTTCGGTCTAATCAGTCTGGCCTTACGTTCTTCGAACTGTACATATATGATCAGTTAAGTTTGCACATTGGTCTAGATCCAAATGTATCTGCTGAATTGCCGGCGCCTTATTATTATGATTTGATGGTACAGTCCGATAACTCTGGCTTTTTCCAGATCACTGTCGAGCCAAATAGTTCAGCTGTGGTTGTTGGAGCCTTCTTGAACGGTCTAGAAATGATGCGAACGGTTAATTCTTCTGATTTGAGTTACTTGCAAGGCCAATCTAGTGGTAAGAATAGTGTTCTTCCAGTGGTCTTGGGCTCGGTTATTGGAGGTTTGGTCCTGGTTTCGGTGGTGGTGGTTGTTGTTTTCATTTGGCGTCTTAAGACTAATAAACAAAAGCCGGTTGAAGGTTCAGATTGGTTGCCAATTCCTGCCACAGCAGGAGGAAGCTCTCACAGCCGAACAAGCCGGTTAACAGACGGAACCATCCAAGGCTCTCCGCTTCGCAACATTAATCTTGGACTAAAGGTTCCTCTGCAGGATCTCCAGTTAGCAACCAAGAACTTCGACGAGAAGCAGATAATTGGAAAGGGTGGTTTTGGCAATGTTTACAAGGGAGTTCTCAAGAATGGCATGAAGGTAGCAGTTAAGAGGAGTGAGCCCGGGTCCGGTCAGGGCCTACCGGAGTTTCAGACTGAGATCATGGTTTTGTCCAAGATTCGCCACCGGCACCTCGTTTCCTTGATCGGTTACTGCGATGAAAGGTACGAGATGATACTTGTTTATGAGTACATGGAGAAAGGGACATTGAGGGATCACTTGTATAACACAAAATTGCCAAGCTTGAGTTGGAAGCAAAGGCTAGAAATTTGCATTGGAGCTGCAAGAGGACTTCAGTACCTTCACAAAGGCGCGTCCGGGGGAATCATTCACCGAGATGTTAACACGGGTGTTAAAGGAACTTTTGGTTATCTTGATCCGGAGTATTTTCGGTCGCAGCAGCTGACAGAAAAATCTGATGTCTATTCATTTGGTGTAGTTCTTTTAGAAGTTTTATGTGCTAGGCCAGCTATTGAGCCTTCCCTTCCAAGGGAGCAAGTGAACCTGGCTGAATGGGGAATCCTTTGCAAGAACAAAGGGGTTCTAGATGACATCATTGATCCTACCATCAAGGGACAATTAGATCAAAACTCGTTCCGGAAATTTAGCGAGACTATAGAGAAATGCTTGCAAGAAGATGGTTCTGATAGGCCAACAATGGGTGATGTGTTGTGGGACTTGGAGTATGCGCTGCAGCTTCAGCGCGGTGCGATACATAGAGAACCGCACGAGGATAGTTCTAGTGGCGCGTCTGCATCGTTCCAGTTGCCCAATGTCCGGCGTCTTCCTTCACTCTCCGCTCTCAGTGAAGTGGATGACATGTCAACTGCTAGGGGTGATCAATCTGATGCTGCAGATGATTCGGTTTTTTCTCAGTTGAATATCAATGAAGCCAGATAA 2451 0.4439 MAIHHQFYTNQLSLPLLLLLVIQFSSLQFQSHGYYTQDKYFINCGSSSNAKDTESGKTYVADSSQVSFSKRSKTETNQSSVPSPIYQTARIFTTQSFYEFPIDTAGTYMVRLHFLAFTSPSNLSSATFNVSVLNFMLLQNFTTKNYTKSPLVKEYYMKIPLGKFKITFTPLSLSFAFVNAIEVFLLPRFLIADEVSGFIPQPAIGQDSLFKYRGVLSLALETKHRINVGDTNVTSNADPLWRTWSSDDTYLVNTQNAKDFKYGGTIQPKVGYDVDGPNANSYTAPFGDVYGTAKWTINGSNLTWSLPVEKNVDHLIRFHFCDFRSNQSGLTFFELYIYDQLSLHIGLDPNVSAELPAPYYYDLMVQSDNSGFFQITVEPNSSAVVVGAFLNGLEMMRTVNSSDLSYLQGQSSGKNSVLPVVLGSVIGGLVLVSVVVVVVFIWRLKTNKQKPVEGSDWLPIPATAGGSSHSRTSRLTDGTIQGSPLRNINLGLKVPLQDLQLATKNFDEKQIIGKGGFGNVYKGVLKNGMKVAVKRSEPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERYEMILVYEYMEKGTLRDHLYNTKLPSLSWKQRLEICIGAARGLQYLHKGASGGIIHRDVNTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARPAIEPSLPREQVNLAEWGILCKNKGVLDDIIDPTIKGQLDQNSFRKFSETIEKCLQEDGSDRPTMGDVLWDLEYALQLQRGAIHREPHEDSSSGASASFQLPNVRRLPSLSALSEVDDMSTARGDQSDAADDSVFSQLNINEAR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121004g00006 816 Gene3D - 38 185 - -
Stsc121004g00006 816 Gene3D - 218 399 - -
Stsc121004g00006 816 FunFam receptor-like protein kinase FERONIA 470 581 - -
Stsc121004g00006 816 Pfam Protein kinase domain 635 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121004g00006 816 SUPERFAMILY Protein kinase-like (PK-like) 492 745 IPR011009 -
Stsc121004g00006 816 MobiDBLite consensus disorder prediction 465 480 - -
Stsc121004g00006 816 PANTHER OS07G0166700 PROTEIN 494 633 IPR045272 GO:0004714|GO:0006468
Stsc121004g00006 816 MobiDBLite consensus disorder prediction 455 480 - -
Stsc121004g00006 816 Gene3D Transferase(Phosphotransferase) domain 1 582 632 - -
Stsc121004g00006 816 Pfam Malectin-like domain 42 397 IPR024788 -
Stsc121004g00006 816 FunFam Putative receptor-like protein kinase 39 187 - -
Stsc121004g00006 816 Gene3D Transferase(Phosphotransferase) domain 1 633 751 - -
Stsc121004g00006 816 ProSitePatterns Protein kinases ATP-binding region signature. 512 534 IPR017441 GO:0005524
Stsc121004g00006 816 Gene3D Phosphorylase Kinase; domain 1 470 581 - -
Stsc121004g00006 816 ProSiteProfiles Protein kinase domain profile. 506 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121004g00006 816 Pfam Protein tyrosine and serine/threonine kinase 509 632 IPR001245 GO:0004672|GO:0006468
Stsc121004g00006 816 MobiDBLite consensus disorder prediction 787 816 - -
Stsc121004g00006 816 MobiDBLite consensus disorder prediction 798 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121004g00006 Stsc-Chr121004 56895 59417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121004g00006 8 816 Receptor kinase-like Gene Family AT2G23200 41.339 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc121004g00006 Malectin_like 2.9e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121004g00006 - - mtr:25493508 934.095