Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121004g00002 ATGACACCATTAATCTCCTACACCTTCTTCCTTTCTATTCTCGTCGTCTTGATAACGCTCAAGTTCCTGTTTTCAACAAGAAGGTTCAAAAACCTTCCACCAGGTCCACCACCTCTTCCCATCTTAGGCAACCTCCGCCAACTCAAATTCCCCATGCACCGAACCCTCCACGAATTCTCTCAAAAGTACGGCCAAGTCTTCTCCCTCTGGTTCGGCTCCCAGTTCGTCGTGGTCGTCTCGTCGCCGTCTCTTGTTCAAGAATGCTTCACCAAGAACGACATCATCTTGGCCAACCGGCCACCGTTCACAGCCGGGAAACACGTCGGCTACAACTTCACCACCGTCACCGTCGCGCCTTACGGAGACCACTGGCGCAATGTCCGCCGTATTATCTCCCTTGATGTCCTGTCCACGCACCGCCTGAACTCGTTCTTGGGAATACGGAAGGACGAGATCATGAGGCTGGTGCAAAGCCTTGCGGCTTCATCGCGAAATGGCGAAGATTTTGCCAAGGTGGAGATGAAGTCGAAGCTCAATGAGATGACGTTCAACACCATCATGAGGATGATCTCGGGGAAGAGGTACTATGGTGGTGACTGTGATGTCGCTGACACAGAGGAAGCGAAGCAGTTCAGGGAGATCATGAAGGAGCTGTTATCGTTTGGAGGGTCAAGTAACCCTTTTGAATTCGTGAAGGTTCTTCGGTGGTTCGATTTTGGGAACGTGGAGAAGAAGCTCAAGGCTATTGCTACGAGATGCGATGCATTCTTGCAGGGGCTTATTGATCAACACAGAATGAAACAGGGTGGTCATAATAAAAATACTATGATTGACCATTTATTGAGCCTGCAACAGTCGCAGCCCGAGTACTACACGGATCAAATCATCAAAGGCATTGTTCTGGTTATGCTTCTTGGAGGAACAGAAACATCGGCAACTTCTTTAGAATGGGCTATGGCTGCATTACTAAACCATCCAGAGGCATTAAAGAAGGCAAAGGAAGAAATTGATACTCAAATAGGACAAGATCGCTTGATTGAAGAATCCGACATTTCGAAACTCCCTTACCTACAAAATATTATCCACGAAACGTTTCGATTGTACCCAGCATTCCCATTATTGGCGCCACATTATTCTTCAAAAGATTGCACCGTTGGAGGATACAACTTCCCAAAGAATACTATTCTCTTGGTAAATGCTTGGGCTATTCATAGAGATCCTGAATTATGGAGGGACCCTACAGAGTTCAAGCCTGAGAGGTTTGAGAAAGAAGGAGAAGCAGAAAAGTTGATTCCATTTGGGCTTGGAAGAAGGGCATGTCCTGGAGCAAACTTGGGGAACCGTACAGTGAGTTTAACTCTGGGATTATTGATTCAATGTTTTGAATGGAAGCGAATGAGTGAAGAAAAAATTGAGATGAGTGAAGGAAAAGGAGCCACCACCCCAAAATTGATTCCTTTGGAGGCCTTGTGTAAAGCACGCCCAAGTATCATTAACAAGGTTTTTTAA 1509 0.4632 MTPLISYTFFLSILVVLITLKFLFSTRRFKNLPPGPPPLPILGNLRQLKFPMHRTLHEFSQKYGQVFSLWFGSQFVVVVSSPSLVQECFTKNDIILANRPPFTAGKHVGYNFTTVTVAPYGDHWRNVRRIISLDVLSTHRLNSFLGIRKDEIMRLVQSLAASSRNGEDFAKVEMKSKLNEMTFNTIMRMISGKRYYGGDCDVADTEEAKQFREIMKELLSFGGSSNPFEFVKVLRWFDFGNVEKKLKAIATRCDAFLQGLIDQHRMKQGGHNKNTMIDHLLSLQQSQPEYYTDQIIKGIVLVMLLGGTETSATSLEWAMAALLNHPEALKKAKEEIDTQIGQDRLIEESDISKLPYLQNIIHETFRLYPAFPLLAPHYSSKDCTVGGYNFPKNTILLVNAWAIHRDPELWRDPTEFKPERFEKEGEAEKLIPFGLGRRACPGANLGNRTVSLTLGLLIQCFEWKRMSEEKIEMSEGKGATTPKLIPLEALCKARPSIINKVF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121004g00002 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Stsc121004g00002 502 PANTHER CYTOCHROME P450 82C3-RELATED 14 494 - -
Stsc121004g00002 502 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121004g00002 502 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121004g00002 502 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121004g00002 502 Pfam Cytochrome P450 33 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121004g00002 502 Gene3D Cytochrome P450 22 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121004g00002 502 FunFam Cytochrome P450 family protein 24 497 - -
Stsc121004g00002 502 CDD CYP81 64 487 - -
Stsc121004g00002 502 SUPERFAMILY Cytochrome P450 33 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121004g00002 502 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121004g00002 502 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121004g00002 502 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121004g00002 502 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121004g00002 502 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121004g00002 502 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121004g00002 502 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121004g00002 502 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121004g00002 502 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121004g00002 Stsc-Chr121004 16061 19552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121004g00002 8 502 Cytochrome P450 AT4G37370 56.000 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121004g00002 K13260 - gmx:100811727 710.294