Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121002g00017 ATGATGAAAGGAATTAGCAATAAGAATAATAATAATAAGAAGGCGTACATGGCAGTGATCCTGATACAAAGCATATACGCAGTGATGTTCCTTCTCTCAAAAGCAGCATTCGACAATGGAATCAACAACTTCATCTTCGTCTTTTACAGGCAGGCCCTAGCCACTGTTTTCCTCGCTCCTTTTGCTTTCTTCCTCGAACGCAAAACTGCACCACCTCTCTCATTTCTCACCATGTGCAAGATCTTCTTCCTTTCTCTCTTCGGGATTACGGGGAGCTTGGACGTATATGGTATAGCGCTTATATACACTTCACCCACTTTGGCTTCTGCTACCACTAACTGCCTTCCAGCTATCACCTTCTTCTTGGCCCTCTTACTCAGGATAGAGGTTCTGAAAGTAAAGACAGCAGCAGGTGGTGCTAAAATGGTAGGTGTGGTGGCATGTTTGTGTGGAGCCGCAACACTTGCTTTCTACAAAGGTCCTCATTTTCAGCTCTCAGGGTACCATCAACTAGTACATCAATCTCACCATCAACAACAACCATCTTCTTCTTCTTCTTCTTGGATAAAGGGTTGCTTCCTCATGCTCCTCTCTAACTTCCTTTTTGGGATCTGGCTAGTGCTACAGGGTTTCGTGGTGAAAGGGTACCCTTCAAAGCTGCGTCTTACGACTCTTCAGTGCTTGTGTAGCTCAATTCAGTCTTTCTGCATTGCATATGGCTTAGAGAGAAACACTGAGCAATGGAAGTTGAGTTGGAATGTCTCACTCATCGCCGTACTATACTGTGTAAGTGACATCACATACATACGGTGCCGTATATATATGAATGTATTATTTATGTATGTATTTGGTATATGTAGGGAATAA 867 0.4314 MMKGISNKNNNNKKAYMAVILIQSIYAVMFLLSKAAFDNGINNFIFVFYRQALATVFLAPFAFFLERKTAPPLSFLTMCKIFFLSLFGITGSLDVYGIALIYTSPTLASATTNCLPAITFFLALLLRIEVLKVKTAAGGAKMVGVVACLCGAATLAFYKGPHFQLSGYHQLVHQSHHQQQPSSSSSSWIKGCFLMLLSNFLFGIWLVLQGFVVKGYPSKLRLTTLQCLCSSIQSFCIAYGLERNTEQWKLSWNVSLIAVLYCVSDITYIRCRIYMNVLFMYVFGICRE 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121002g00017 288 Pfam EamA-like transporter family 14 144 IPR000620 GO:0016020
Stsc121002g00017 288 PANTHER WAT1-RELATED PROTEIN 15 264 IPR030184 GO:0016020|GO:0022857
Stsc121002g00017 288 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121002g00017 Stsc-Chr121002 59176 61420 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121002g00017 9 265 Nodulin-like Gene Family AT5G64700 59.924 4.69e-98 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121002g00017 - - ccaj:109799350 354.755