Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121002g00016 ATGATGAAAGGAATTAGCAATAAGAATAATAATAATAAGAAGGCGTACATGGCAGTGATCCTGATACAAAGCATATACGCAGTGATGTTCCTTCTCTCAAAAGCAGCATTCGACAATGGAATCAACAACTTCATCTTCGTCTTTTACAGGCAGGCCCTAGCCACTGTTTTCCTCGCTCCTTTTGCTTTCTTCCTCGAACGCAAAACTGCACCACCTCTCTCATTTCTCACCATGTGCAAGATCTTCTTCCTTTCTCTCTTCGGGATTACGGGGAGCTTGGACGTATATGGTATAGCGCTTATATACACTTCACCCACTTTGGCTTCTGCTACCACTAACTGCCTTCCAGCTATCACCTTCTTCTTGGCCCTCTTACTCAGGATAGAGGTTCTGAAAGTAAAGACAGCAGCAGGTGGTGCTAAAATGGTAGGTGTGGTGGCATGTTTGTGTGGAGCCGCAACACTTGCTTTCTACAAAGGTCCTCATTTTCAGCTCTCAGGGTACCATCAACTAGTACATCAATCTCACCATCAACAACAACCATCTTCTTCTTCTTCTTCTTGGATAAAGGGTTGCTTCCTCATGCTCCTCTCTAACTTCCTTTTTGGGATCTGGCTAGTGCTACAGGGTTTCGTGGTGAAAGGGTACCCTTCAAAGCTGCGTCTTACGACTCTTCAGTGCTTGTGTAGCTCAATTCAGTCTTTCTGCATTGCATATGGCTTAGAGAGAAACACTGAGCAATGGAAGTTGAGTTGGAATGTCTCACTCATCGCCGTACTATACTGTGGAATAATGGTGACGGGTGTGACGTATTACATACAAACATGGGTGATAGAGAAGAAAGGGCCAGTGTTTCTCGCCATGTCAACGCCATTAGCTTTCATAATCACACTCCTCTCCTCCGCAATTCTCCTCCGCCAGATCCTAACTTTAGGAAGCATTTTAGGTGGGCTCCTATTGGTTATAGGACTGTATAGCGTTCTGTGGGGTAAGACAAGAGAGGAAATGCCAAAAGTCACAGATGACTTGGACTTGGAGCTTGGATCGGAGGCGAACCACCCACCGCCGCAATCACAATCACCTTGA 1086 0.4549 MMKGISNKNNNNKKAYMAVILIQSIYAVMFLLSKAAFDNGINNFIFVFYRQALATVFLAPFAFFLERKTAPPLSFLTMCKIFFLSLFGITGSLDVYGIALIYTSPTLASATTNCLPAITFFLALLLRIEVLKVKTAAGGAKMVGVVACLCGAATLAFYKGPHFQLSGYHQLVHQSHHQQQPSSSSSSWIKGCFLMLLSNFLFGIWLVLQGFVVKGYPSKLRLTTLQCLCSSIQSFCIAYGLERNTEQWKLSWNVSLIAVLYCGIMVTGVTYYIQTWVIEKKGPVFLAMSTPLAFIITLLSSAILLRQILTLGSILGGLLLVIGLYSVLWGKTREEMPKVTDDLDLELGSEANHPPPQSQSP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121002g00016 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Stsc121002g00016 361 Pfam EamA-like transporter family 14 144 IPR000620 GO:0016020
Stsc121002g00016 361 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
Stsc121002g00016 361 PANTHER WAT1-RELATED PROTEIN 15 338 IPR030184 GO:0016020|GO:0022857
Stsc121002g00016 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121002g00016 Stsc-Chr121002 59176 61420 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121002g00016 9 262 Nodulin-like Gene Family AT5G64700 60.232 1.90e-95 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121002g00016 - - ccaj:109799350 459.529