Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121002g00002 ATGTGCATGCTTCAGTTGGTGACTTCTGAATATCCTTATAGTGAATGCAGAAACTCAGCTCAGATATACAAGAAGGTTTCATCTGGTATAAAACCTGTTGCACTTTCTAAAGTCAAAGATCCAGAAGTAAAATCCTTTATTGAAAAATGTCTTGTCCCAGCATCTCAAAGATTGTCTGCAAGGGAGCTTCTGATGCATTCCTTTCTTGACTTGAATGGTTCAACAAGGATTCATCCTTTTCCATTACCAGATATTGTTCTTCCCAAATTTGGAGCCTTCGAAAGCCGATGCTTAATGTCAGAAGGTCCTAGTAGTGCACGTAGTGGAAATATTTCTTTGGATCTTGGTGGCATGAGCGAACTACCCGTGATCACTGTATTTGATAACTCTACAGATGATGCATCATCGTCTCATTGCCCATCTGTTGAGATAAGAATGTCAAACAGAGATGACATATTCTTTCTGAAAGGCCATGAAAATGATAAGAATTCCGTATCATTGGTTCTCCGGATAGCTGATGTGAGTGGAAGGGCAAGAAATATCCATTTTATATTCTATCTTGACACTGATACTGCTGTCTCGGTTTCAAGTGAAATGGTTGAACAACTTGAGCTTGCTGAACAAAATGTCCTTTTCATAGCCGAGTTAATAGATTTGTTATTGCTGAAGTTGGTTCCTGACTGGGAACCCTGTGTTTCAATTGACCATTTGGTTTCTCCAAATGGCAAATATCATGTGACCCAACATAGAGCCTTGGAGTCGGCAAAATACCAAGAAAGCCCAAAACTTGCCAGCCAAATTGTGCCTCAAGAGTTAGGTGCCTCAACCTCACCTGGAAGATCAGTTGCAAAAGAGAACCATGATAATATGGAATTTGATGAGGTTGTATCTGAAGAGAGCATTGGTATCCAAAGAGCAACTAAGACAGATGATCTATGTTCCGAGGTGTCATATGCTTCAGCATCGTCAGAATTAAATGATAACAAGTTTTCCGTAGCTTCATTTATGTCTTCTACTGAATCAGGACTAGCAGACTTAAACATAACTATACCGAATGGAGGGAGTCAATCCTCATTTGCATCCGAAATTGTGGCATCTCCTGATTATAGGATCAAGTATTCAGAAATGGGAAGTGATGATACGATGAGCTTCTCTACTCATCCCATTAGTGTTTCCTCCGTGTCTGAACATGAGGATGAATTCAGAACGGAGCTAGAAATGATTGAACAGAAGTATCAAGATGCGATTAAAGATTTTTCAAGAAGAAGATACCAAGCCGTCGTCGAGATTAGAAGGAGAATGTCAGAAAAGATGTTATCATCATCATCATCGTAG 1335 0.397 MCMLQLVTSEYPYSECRNSAQIYKKVSSGIKPVALSKVKDPEVKSFIEKCLVPASQRLSARELLMHSFLDLNGSTRIHPFPLPDIVLPKFGAFESRCLMSEGPSSARSGNISLDLGGMSELPVITVFDNSTDDASSSHCPSVEIRMSNRDDIFFLKGHENDKNSVSLVLRIADVSGRARNIHFIFYLDTDTAVSVSSEMVEQLELAEQNVLFIAELIDLLLLKLVPDWEPCVSIDHLVSPNGKYHVTQHRALESAKYQESPKLASQIVPQELGASTSPGRSVAKENHDNMEFDEVVSEESIGIQRATKTDDLCSEVSYASASSELNDNKFSVASFMSSTESGLADLNITIPNGGSQSSFASEIVASPDYRIKYSEMGSDDTMSFSTHPISVSSVSEHEDEFRTELEMIEQKYQDAIKDFSRRRYQAVVEIRRRMSEKMLSSSSS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121002g00002 444 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 428 - -
Stsc121002g00002 444 Gene3D Transferase(Phosphotransferase) domain 1 1 75 - -
Stsc121002g00002 444 Gene3D - 163 229 - -
Stsc121002g00002 444 SUPERFAMILY Protein kinase-like (PK-like) 2 70 IPR011009 -
Stsc121002g00002 444 Coils Coil 398 418 - -
Stsc121002g00002 444 ProSiteProfiles Protein kinase domain profile. 1 69 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121002g00002 Stsc-Chr121002 11848 13581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121002g00002 1 240 MAP Kinase Kinase Kinase AT1G49160 60.833 7.21e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121002g00002 K08867 - gmx:121175054 472.241