Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121001g00002 ATGGAAAAGGTACAAGAAGAGATAGACATCCATGTCAGAAACAAAAGATGCATAAATGAGTTTGACATAAATAAATTAGTCTACCTTCAAGTTGTGGTTAAAGAGACATTAAGATTGTACCCACCTTCTTCTCTTTCGGGAATCCGTGAATTCAGAGAAGATTGCTTCCTTGGTGGCTACCATGTGAGCAAGGGAACTCGATTATTAACAAATCTTTGGAAGATCCAAACAGATCCAAGCATTTGGGAAGATCCATTGGAATTCAAGCTAGAGAGGTTCCTCACTACTCATAAGGAAGTTGATGTGAAAGGGAACCATTTTGAGTATATACCTTTTGGGAGTGGTAGAAGGATATGCCCTGAAATATCATTTGGGATTCGAACAACACATTTGACTCTAACAAGCTTTCTTCAGTGTTTTGAACTCTCAAAAGCATCAAGTGAACCTATTGATATGACTGCAGTGAACATCAAAGTTACTCCATTGAAAGTTCTTATCAAACCCCGTTTATCTTCTCTTCTTTATAAAGCCATGTGA 537 0.3762 MEKVQEEIDIHVRNKRCINEFDINKLVYLQVVVKETLRLYPPSSLSGIREFREDCFLGGYHVSKGTRLLTNLWKIQTDPSIWEDPLEFKLERFLTTHKEVDVKGNHFEYIPFGSGRRICPEISFGIRTTHLTLTSFLQCFELSKASSEPIDMTAVNIKVTPLKVLIKPRLSSLLYKAM 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121001g00002 178 Pfam Cytochrome P450 1 153 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121001g00002 178 SUPERFAMILY Cytochrome P450 1 169 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121001g00002 178 Gene3D Cytochrome P450 1 172 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121001g00002 178 PRINTS E-class P450 group IV signature 76 94 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121001g00002 178 PRINTS E-class P450 group IV signature 26 42 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121001g00002 178 PRINTS E-class P450 group IV signature 103 119 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121001g00002 178 PANTHER CYTOCHROME P450 82C3-RELATED 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121001g00002 Stsc-Chr121001 37640 38176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121001g00002 1 175 Cytochrome P450 AT4G31970 50.556 4.99e-57 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121001g00002 - - gmx:100802193 269.24