Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121000g00006 ATGGAAGTTCTAGCACTCGGAGAAGAACCACTTAGCGACTTCGATTGTGACGCCTTTCTCCAACAATCACCGGAGCTTCATGTTGACGATATCTTCCATGATGAGGAAGCTCCTTCTTTTGTAGCCGGTGACGGTGTTTTATCGGAGATCGAGAACTTGTTGATGGCCGACGATGTAGACGACGGCGCCGGCATCCCTGCGACTCCGTCGTTGGAGTCTGACTATGACAAGCTTCTTGCTGAAATACTCGTCGAGCCGCACGGTGGTGACTCCGACGACGGTTCCACTCCTTCTAACGAAGATTCCGATAAGGATAGGGCTGATGCCGCGGATCCTAAAGAGATTGGCACTGAACCCGTTTCAAAGAAGCTAACTAGGAAGATGAGGAACAGAGATGCTGCTGTGAGATCAAGAGAGAGGAAGAAGTTGTATGTAAAGGACCTTGAGATGAAAAGTAGGTATTATGAAGGGGAATGCCGAAGACTGGGGCATTTGCTCCAGTGCTGCTTTGCCGAGAACCATGCTTTGCGTCTCTGTTTGCAGGCACGAGGTGCATTAAATGCTTCCATGACCAAGCAGGAGTCTGCTGTGCTCTTGTTGGGTAAGCCATACAGTATATTGACTCAACCTCTTTCTTACTATTTGTTCTTGTTTTGTTTCATGCATTGTAATTCAATGGCTAAAAGACCACTATGA 696 0.477 MEVLALGEEPLSDFDCDAFLQQSPELHVDDIFHDEEAPSFVAGDGVLSEIENLLMADDVDDGAGIPATPSLESDYDKLLAEILVEPHGGDSDDGSTPSNEDSDKDRADAADPKEIGTEPVSKKLTRKMRNRDAAVRSRERKKLYVKDLEMKSRYYEGECRRLGHLLQCCFAENHALRLCLQARGALNASMTKQESAVLLLGKPYSILTQPLSYYLFLFCFMHCNSMAKRPL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121000g00006 231 SUPERFAMILY Leucine zipper domain 122 178 IPR046347 GO:0003700|GO:0006355
Stsc121000g00006 231 CDD bZIP_HY5-like 123 174 - -
Stsc121000g00006 231 Gene3D - 121 182 - -
Stsc121000g00006 231 MobiDBLite consensus disorder prediction 85 121 - -
Stsc121000g00006 231 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 91 201 - -
Stsc121000g00006 231 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 120 162 IPR004827 GO:0003700|GO:0006355
Stsc121000g00006 231 MobiDBLite consensus disorder prediction 97 121 - -
Stsc121000g00006 231 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 126 140 IPR004827 GO:0003700|GO:0006355
Stsc121000g00006 231 SMART brlzneu 118 182 IPR004827 GO:0003700|GO:0006355
Stsc121000g00006 231 Pfam Basic region leucine zipper 123 162 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121000g00006 Stsc-Chr121000 41954 43718 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121000g00006 135 197 bZIP Transcription Factor Family AT1G42990 62.500 6.48e-18 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc121000g00006 bZIP_2 2.6e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121000g00006 - - ahf:112743660 340.117