Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121000g00005 ATGGAAGTTCTAGCACTCGGAGAAGAACCACTTAGCGACTTCGATTGTGACGCCTTTCTCCAACAATCACCGGAGCTTCATGTTGACGATATCTTCCATGATGAGGAAGCTCCTTCTTTTGTAGCCGGTGACGGTGTTTTATCGGAGATCGAGAACTTGTTGATGGCCGACGATGTAGACGACGGCGCCGGCATCCCTGCGACTCCGTCGTTGGAGTCTGACTATGACAAGCTTCTTGCTGAAATACTCGTCGAGCCGCACGGTGGTGACTCCGACGACGGTTCCACTCCTTCTAACGAAGATTCCGATAAGGATAGGGCTGATGCCGCGGATCCTAAAGAGATTGGCACTGAACCCGTTTCAAAGAAGCTAACTAGGAAGATGAGGAACAGAGATGCTGCTGTGAGATCAAGAGAGAGGAAGAAGTTGTATGTAAAGGACCTTGAGATGAAAAGTAGGTATTATGAAGGGGAATGCCGAAGACTGGGGCATTTGCTCCAGTGCTGCTTTGCCGAGAACCATGCTTTGCGTCTCTGTTTGCAGGCACGAGGTGCATTAAATGCTTCCATGACCAAGCAGGAGTCTGCTGTGCTCTTGTTGGAATCCCTGCTGTTGGGTTCCCTGCTGGGGTTCATGGGAGTCATATGCCAACTCAGTCTAAGCCTGATAGCCTTGTCAATAGCACTACTTCCAAGAGAAAACAAGGAGAAGAGAAACGAAAGAAGGGTAGCTCAAAAAGGACCAGAAAATGATATATCTGAATCTGAGTGTTTTTGGGTGCGATCCTCTACAAAGTGTAGAAGTTGTCGGGCTTCAAGGAGAAAGATGAAGTTCAATATTCTTGCATTCTATAACTTCTGA 861 0.4774 MEVLALGEEPLSDFDCDAFLQQSPELHVDDIFHDEEAPSFVAGDGVLSEIENLLMADDVDDGAGIPATPSLESDYDKLLAEILVEPHGGDSDDGSTPSNEDSDKDRADAADPKEIGTEPVSKKLTRKMRNRDAAVRSRERKKLYVKDLEMKSRYYEGECRRLGHLLQCCFAENHALRLCLQARGALNASMTKQESAVLLLESLLLGSLLGFMGVICQLSLSLIALSIALLPRENKEKRNERRVAQKGPENDISESECFWVRSSTKCRSCRASRRKMKFNILAFYNF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121000g00005 286 CDD bZIP_HY5-like 123 174 - -
Stsc121000g00005 286 Gene3D - 121 182 - -
Stsc121000g00005 286 MobiDBLite consensus disorder prediction 85 121 - -
Stsc121000g00005 286 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 91 250 - -
Stsc121000g00005 286 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 120 162 IPR004827 GO:0003700|GO:0006355
Stsc121000g00005 286 SUPERFAMILY Leucine zipper domain 122 178 IPR046347 GO:0003700|GO:0006355
Stsc121000g00005 286 MobiDBLite consensus disorder prediction 97 121 - -
Stsc121000g00005 286 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 126 140 IPR004827 GO:0003700|GO:0006355
Stsc121000g00005 286 SMART brlzneu 118 182 IPR004827 GO:0003700|GO:0006355
Stsc121000g00005 286 Pfam bZIP transcription factor 121 160 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121000g00005 Stsc-Chr121000 41954 45220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121000g00005 135 283 bZIP Transcription Factor Family AT1G42990 46.053 2.69e-17 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc121000g00005 bZIP_1 1.6e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121000g00005 - - ahf:112743660 426.017