Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121000g00004 ATGGAAGTTCTAGCACTCGGAGAAGAACCACTTAGCGACTTCGATTGTGACGCCTTTCTCCAACAATCACCGGAGCTTCATGTTGACGATATCTTCCATGATGAGGAAGCTCCTTCTTTTGTAGCCGGTGACGGTGTTTTATCGGAGATCGAGAACTTGTTGATGGCCGACGATGTAGACGACGGCGCCGGCATCCCTGCGACTCCGTCGTTGGAGTCTGACTATGACAAGCTTCTTGCTGAAATACTCGTCGAGCCGCACGGTGGTGACTCCGACGACGGTTCCACTCCTTCTAACGAAGATTCCGATAAGGATAGGGCTGATGCCGCGGATCCTAAAGAGATTGGCACTGAACCCGTTTCAAAGAAGCTAACTAGGAAGATGAGGAACAGAGATGCTGCTGTGAGATCAAGAGAGAGGAAGAAGTTGTATGTAAAGGACCTTGAGATGAAAAGTAGGTATTATGAAGGGGAATGCCGAAGACTGGGGCATTTGCTCCAGTGCTGCTTTGCCGAGAACCATGCTTTGCGTCTCTGTTTGCAGGCACGAGGTGCATTAAATGCTTCCATGACCAAGCAGGAGTCTGCTGTGCTCTTGTTGGGAATTTGA 609 0.4975 MEVLALGEEPLSDFDCDAFLQQSPELHVDDIFHDEEAPSFVAGDGVLSEIENLLMADDVDDGAGIPATPSLESDYDKLLAEILVEPHGGDSDDGSTPSNEDSDKDRADAADPKEIGTEPVSKKLTRKMRNRDAAVRSRERKKLYVKDLEMKSRYYEGECRRLGHLLQCCFAENHALRLCLQARGALNASMTKQESAVLLLGI 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121000g00004 202 SUPERFAMILY Leucine zipper domain 122 178 IPR046347 GO:0003700|GO:0006355
Stsc121000g00004 202 CDD bZIP_HY5-like 123 174 - -
Stsc121000g00004 202 Gene3D - 121 182 - -
Stsc121000g00004 202 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 120 162 IPR004827 GO:0003700|GO:0006355
Stsc121000g00004 202 Pfam Basic region leucine zipper 123 162 IPR004827 GO:0003700|GO:0006355
Stsc121000g00004 202 MobiDBLite consensus disorder prediction 85 119 - -
Stsc121000g00004 202 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 126 140 IPR004827 GO:0003700|GO:0006355
Stsc121000g00004 202 SMART brlzneu 118 182 IPR004827 GO:0003700|GO:0006355
Stsc121000g00004 202 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 91 201 - -
Stsc121000g00004 202 MobiDBLite consensus disorder prediction 97 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121000g00004 Stsc-Chr121000 41954 45220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121000g00004 135 197 bZIP Transcription Factor Family AT1G42990 62.500 2.98e-18 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc121000g00004 bZIP_2 2.1e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121000g00004 - - ahf:112743660 338.961