Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc120999g00006 ATGAGTGGGATTAGCTCACTTGACCTTAACCAAAAGCTGAAAGACGTGAGATCCAGTGGAGATGATGATCATGTGAAACCCGGTGCAACTATGAGTGATTCATCAAAACATCAGATGTCGAAAACTCATCAAGCTGAACATGCGTTTTTAATGAAGGATCGCATGGTTAGAAACCAAGTTGATGATCAGATCCATCACCACGATGATCCAAATAATGATTCTGTGAATGATGCTGCTGTTGATGGTGTAAAAGTTGTTGCTGCTGTTGATGGTGCTGATGGTGGAAAACTTGCTGATGGTGATGAAGCGGGAATCAGGAGCCTTCCGTACAAGAAACATGGACTGTACACGTGTCCAAAGTGTAAGGTAGTGTTTTTAACATCACAAAAATTTGCGGTTCATACAGGTTCTCACTATAAGCATGAGACTAAGGATGAGAAAAAGAAGAGAAGAATGCTGAAAATGATGTGTAGAAACAAGAAAAGAGCCCACGAAATTCATCAACAGTTCATGGATAATTTAGCAGGAGGAGAAGGATCCAGCACTTTGCATGAGGTGAAAGTGGAATATCAACCCTATTTTCATAATGATAAAGTTGATGCTCCTCCTGGTTTTCCTGTCCCTTTGGGCCCTGCAAAGATCAAGGTGGAGCCTTTCCCATAG 663 0.4163 MSGISSLDLNQKLKDVRSSGDDDHVKPGATMSDSSKHQMSKTHQAEHAFLMKDRMVRNQVDDQIHHHDDPNNDSVNDAAVDGVKVVAAVDGADGGKLADGDEAGIRSLPYKKHGLYTCPKCKVVFLTSQKFAVHTGSHYKHETKDEKKKRRMLKMMCRNKKRAHEIHQQFMDNLAGGEGSSTLHEVKVEYQPYFHNDKVDAPPGFPVPLGPAKIKVEPFP 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc120999g00006 220 ProSitePatterns Zinc finger C2H2 type domain signature. 118 138 IPR013087 -
Stsc120999g00006 220 MobiDBLite consensus disorder prediction 14 30 - -
Stsc120999g00006 220 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc120999g00006 Stsc-Chr120999 41286 42143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc120999g00006 84 167 C2H2 Transcription Factor Family AT2G18490 44.706 5.04e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc120999g00006 - - ahf:112709584 150.599